RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 RTL8BQ17RB0 113 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 C9orf152Q5JTZ5 239 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 MOGAT3Q86VF5 341 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 RCC1LQ96I51 464 aaKnown RBP7.37□□□□□ -1.23
LIG4-204ENST00000611712 HS3ST6Q96QI5 342 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 MANBALQ9NQG1 85 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 DOK5Q9P104 306 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 XKRY2A2RUG3 117 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 S1PR2O95136 353 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 CYB5R3P00387 301 aaPredicted RBP7.37□□□□□ -1.23
LIG4-204ENST00000611712 GLIPR1P48060 266 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 BHLHA15Q7RTS1 189 aaPredicted RBP7.37□□□□□ -1.23
LIG4-204ENST00000611712 WFDC8Q8IUA0 241 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 OR8G5Q8NG78 346 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 PLPPR1Q8TBJ4 325 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 CORO2AQ92828 525 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 CTDSP1Q9GZU7 261 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 TREM2Q9NZC2 230 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 ZG16O60844 167 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 ADH4P08319 380 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 OR2T10Q8NGZ9 312 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 SSMEM1Q8WWF3 244 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 TMEM18Q96B42 140 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 COMMD5Q9GZQ3 224 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 OR6C3Q9NZP0 311 aa7.37□□□□□ -1.23
LIG4-204ENST00000611712 LOC102723971A0A1B0GUV8 181 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 FAM90A26D6RGX4 464 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 SMPD2O60906 423 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 SP9P0CG40 484 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 PSG7Q13046 419 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 PLGLAQ15195 96 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 LRFN3Q9BTN0 628 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 PRO1933Q9H354 126 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 TUBA4BQ9H853 241 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 METTL1Q9UBP6 276 aaKnown RBP7.36□□□□□ -1.23
LIG4-204ENST00000611712 A0A1W2PPE3 182 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 C12orf77C9JDV5 145 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 SSTR5P35346 364 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 WNT5AP41221 380 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 IL15RAQ13261 267 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 RBMXL3Q8N7X1 1067 aaKnown RBP7.36□□□□□ -1.23
LIG4-204ENST00000611712 TMEM171Q8WVE6 324 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 GTF3AQ92664 365 aaKnown RBP7.36□□□□□ -1.23
LIG4-204ENST00000611712 WDR61Q9GZS3 305 aaKnown RBP7.36□□□□□ -1.23
LIG4-204ENST00000611712 WIPI2Q9Y4P8 454 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 TTC28Q96AY4 2481 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 ELOA3CA0A087WX78 387 aaPredicted RBP7.36□□□□□ -1.23
LIG4-204ENST00000611712 LILRA1O75019 489 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 DKK1O94907 266 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 LY86O95711 162 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 HRASP01112 189 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 ZNF883P0CG24 379 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 ZNF324BQ6AW86 544 aaPredicted RBP7.36□□□□□ -1.23
LIG4-204ENST00000611712 KDF1Q8NAX2 398 aaPredicted RBP7.36□□□□□ -1.23
LIG4-204ENST00000611712 OR4S2Q8NH73 311 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 CLDND2Q8NHS1 167 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 ZDHHC11Q9H8X9 412 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 CISD1Q9NZ45 108 aaKnown RBP7.36□□□□□ -1.23
LIG4-204ENST00000611712 RPH3ALQ9UNE2 315 aa7.36□□□□□ -1.23
LIG4-204ENST00000611712 CXorf65A6NEN9 183 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 CD1BP29016 333 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 RAB7AP51149 207 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 MRPS11P82912 194 aaKnown RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 TNFAIP6P98066 277 aaPredicted RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 TIGITQ495A1 244 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 NMSQ5H8A3 153 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 C16orf82Q7Z2V1 217 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 SSC4DQ8WTU2 575 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 RAB24Q969Q5 203 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 SLC35E1Q96K37 410 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 PSMG3Q9BT73 122 aaPredicted RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 GPR61Q9BZJ8 451 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 EGLN1Q9GZT9 426 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 OPN3Q9H1Y3 402 aaPredicted RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 TIMM8BQ9Y5J9 83 aaPredicted RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 TRAPPC1Q9Y5R8 145 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 FOXI3A8MTJ6 420 aaPredicted RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 GALR2O43603 387 aaPredicted RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 ICAM4Q14773 271 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 ZNF525Q8N782 197 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 ZNF383Q8NA42 475 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 OR10X1Q8NGY0 326 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 PACRGQ96M98 296 aaPredicted RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 TMEM131Q92545 1883 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 MARCH11A6NNE9 402 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 PRRG2O14669 202 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 PTBP3O95758 552 aaKnown RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 BATFQ16520 125 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 WDR25Q64LD2 544 aaPredicted RBP7.35□□□□□ -1.23
LIG4-204ENST00000611712 ABHD5Q8WTS1 349 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 WDYHV1Q96HA8 205 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 P2RX4Q99571 388 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 SSUH2Q9Y2M2 353 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 DOCK10Q96BY6 2186 aa7.35□□□□□ -1.23
LIG4-204ENST00000611712 ODAMA1E959 279 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 J3QW42 95 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 CLDN14O95500 239 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 GYPAP02724 150 aa7.34□□□□□ -1.23
LIG4-204ENST00000611712 ACAA1P09110 424 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms