RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 RCHY1Q96PM5 261 aa9.62□□□□□ -0.87
HLA-F-230ENST00000606273 CMSS1Q9BQ75 279 aaKnown RBP9.62□□□□□ -0.87
HLA-F-230ENST00000606273 MCRIP2Q9BUT9 160 aaKnown RBP9.62□□□□□ -0.87
HLA-F-230ENST00000606273 CLEC7AQ9BXN2 247 aa9.62□□□□□ -0.87
HLA-F-230ENST00000606273 ZNF230Q9UIE0 474 aaPredicted RBP9.62□□□□□ -0.87
HLA-F-230ENST00000606273 PSG11Q9UQ72 335 aa9.62□□□□□ -0.87
HLA-F-230ENST00000606273 ETV7Q9Y603 341 aa9.62□□□□□ -0.87
HLA-F-230ENST00000606273 STARD9Q9P2P6 4700 aa9.62□□□□□ -0.87
HLA-F-230ENST00000606273 IGKV1D-8A0A087WSZ0 117 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 TRBV6-6A0A0A6YYG2 114 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 TMEM235A6NFC5 223 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 H3BUI4 141 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 SDCBPO00560 298 aaPredicted RBP9.61□□□□□ -0.87
HLA-F-230ENST00000606273 SLC31A2O15432 143 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 SSX5O60225 188 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 SCTP09683 121 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 RANBP1P43487 201 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 GNG10P50151 68 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 RORCP51449 518 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 DIAPH2-AS1Q14236 149 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 TMEM95Q3KNT9 176 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 CENPVQ7Z7K6 275 aaPredicted RBP9.61□□□□□ -0.87
HLA-F-230ENST00000606273 SAMD12Q8N8I0 201 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 OR10V1Q8NGI7 309 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 SETD6Q8TBK2 473 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 DYNC2LI1Q8TCX1 351 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 ABCG5Q9H222 651 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 CHMP1AQ9HD42 196 aaPredicted RBP9.61□□□□□ -0.87
HLA-F-230ENST00000606273 Q9N2K0 584 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 C12orf4Q9NQ89 552 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 COMMD3Q9UBI1 195 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 TCF19Q9Y242 345 aa9.61□□□□□ -0.87
HLA-F-230ENST00000606273 TRAV18A0A075B6X5 111 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 IGKV1-6A0A0C4DH72 117 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 A6NDX4 124 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 VGLL3A8MV65 326 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 J3QR06 171 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 HPGDSO60760 199 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 FCGR3AP08637 254 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 VDAC2P45880 294 aaPredicted RBP9.6□□□□□ -0.87
HLA-F-230ENST00000606273 ZNF134P52741 427 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 HLA-DRB5Q30154 266 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 PLA1AQ53H76 456 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 C6orf183Q5T699 404 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 OR52W1Q6IF63 320 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 ZNF439Q8NDP4 499 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 OR10A7Q8NGE5 316 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 NUDCD2Q8WVJ2 157 aa9.6□□□□□ -0.87
HLA-F-230ENST00000606273 PARP12Q9H0J9 701 aaKnown RBP9.6□□□□□ -0.87
HLA-F-230ENST00000606273 LY6LH3BQJ8 138 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 BUB1B-PAK6H3BSN5 160 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 TMEM127O75204 238 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 CD3GP09693 182 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 ZNF182P17025 639 aaPredicted RBP9.59□□□□□ -0.87
HLA-F-230ENST00000606273 ELK1P19419 428 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 PPP1CCP36873 323 aaKnown RBP9.59□□□□□ -0.87
HLA-F-230ENST00000606273 MADCAM1Q13477 382 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 SSX2Q16385 188 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 CT45A1Q5HYN5 189 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 UBE2NLQ5JXB2 153 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 HACD4Q5VWC8 232 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 TMEM219Q86XT9 240 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 OR52M1Q8NGK5 317 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 OR9G1Q8NH87 305 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 CT45A3Q8NHU0 189 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 RBMXL1Q96E39 390 aaKnown RBP9.59□□□□□ -0.87
HLA-F-230ENST00000606273 BCL7BQ9BQE9 202 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 MIXL1Q9H2W2 232 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 OR1A1Q9P1Q5 309 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 TBL2Q9Y4P3 447 aaKnown RBP9.59□□□□□ -0.87
HLA-F-230ENST00000606273 HILPDAQ9Y5L2 63 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 RYR1P21817 5038 aa9.59□□□□□ -0.87
HLA-F-230ENST00000606273 RBMY1BA6NDE4 496 aaKnown RBP9.58□□□□□ -0.88
HLA-F-230ENST00000606273 RBMY1EA6NEQ0 496 aaKnown RBP9.58□□□□□ -0.88
HLA-F-230ENST00000606273 SERPINE3A8MV23 424 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 CTDSP2O14595 271 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 SPINT2O43291 252 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 RBMY1DP0C7P1 496 aaKnown RBP9.58□□□□□ -0.88
HLA-F-230ENST00000606273 GSTT2P0CG29 244 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 GSTT2BP0CG30 244 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 LGALS4P56470 323 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 HLA-DRB3P79483 266 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 ARFRP1Q13795 201 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 MORN2Q502X0 79 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 TRAT1Q6PIZ9 186 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 ZNF554Q86TJ5 538 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 ZNF596Q8TC21 504 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 IL1F10Q8WWZ1 152 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 PRR25Q96S07 402 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 RIMS4Q9H426 269 aaPredicted RBP9.58□□□□□ -0.88
HLA-F-230ENST00000606273 AUNIPQ9H7T9 357 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 OR2S2Q9NQN1 319 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 KCNIP1Q9NZI2 227 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 GNG12Q9UBI6 72 aa9.58□□□□□ -0.88
HLA-F-230ENST00000606273 TRDCB7Z8K6 153 aa9.57□□□□□ -0.88
HLA-F-230ENST00000606273 TOR1AO14656 332 aa9.57□□□□□ -0.88
HLA-F-230ENST00000606273 XRCC3O43542 346 aa9.57□□□□□ -0.88
HLA-F-230ENST00000606273 HLA-DQB1P01920 261 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms