RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 GPX5O75715 221 aa11.52□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 FUT3P21217 361 aa11.52□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 MRPL30Q8TCC3 161 aaKnown RBP11.52□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PHB2Q99623 299 aa11.52□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ZNF184Q99676 751 aaPredicted RBP11.52□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 MED4Q9NPJ6 270 aa11.52□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 E9PI62 339 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 H3BNX3 289 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 GLAP06280 429 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 FOLR2P14207 255 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 APOC4P55056 127 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 RIPK1Q13546 671 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ANKRD55Q3KP44 614 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 TRUB1Q8WWH5 349 aaKnown RBP11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ABHD14BQ96IU4 210 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 SELENOIQ9C0D9 397 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 GABARAPL1Q9H0R8 117 aa11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 EXOGQ9Y2C4 368 aaKnown RBP11.51□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 C2orf70A6NJV1 201 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 FAM90A7PA6NKC0 464 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 FAM90A23PA8MXZ1 464 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 BMPR1BO00238 502 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 TUSC2O75896 110 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 BAG2O95816 211 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 IGKV1-16P04430 117 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 EXOSC2Q13868 293 aaKnown RBP11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 DEFB135Q30KP9 77 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 MEDAGQ5VYS4 303 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 GLIPR1L1Q6UWM5 242 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 Q6ZWC4 215 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 DRAXINQ8NBI3 349 aaPredicted RBP11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 GABARAPL3Q9BY60 117 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 BANF2Q9H503 90 aa11.5□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 MSGN1A6NI15 193 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 APOA2P02652 100 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 APELAP0DMC3 54 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ATP5G2Q06055 141 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 AWAT2Q6E213 333 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 LINC00336Q6ZUF6 198 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PDPNQ86YL7 162 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 MUL1Q969V5 352 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 LGALS12Q96DT0 336 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 SULT4A1Q9BR01 284 aa11.49□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 MPPED1O15442 326 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PDCD6O75340 191 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 CRTAPO75718 401 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 MGMTP16455 207 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 CAPGP40121 348 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PRR20EP86478 221 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PRR20CP86479 221 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PRR20DP86480 221 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PRR20BP86481 221 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PRR20AP86496 221 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 PJVKQ0ZLH3 352 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 HMGN3Q15651 99 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ZNF57Q68EA5 555 aaPredicted RBP11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 JAGN1Q8N5M9 183 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ORAI1Q96D31 301 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 CKLFQ9UBR5 152 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 SELENOKQ9Y6D0 94 aa11.48□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 UBE2CO00762 179 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 SCAF4O95104 1147 aaKnown RBP11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 IFNA4P05014 189 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 EDN2P20800 178 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 FASP25445 335 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 MAP2K4P45985 399 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 GTF2A1P52655 376 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 SSBP2P81877 361 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 RHOGP84095 191 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 TM4SF20Q53R12 229 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 SLC25A30Q5SVS4 291 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 TMEM61Q8N0U2 210 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 EDARADDQ8WWZ3 215 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 OR14A2Q96R54 314 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 AKIP1Q9NQ31 210 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ZNF446Q9NWS9 450 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ERVK13-1Q9NX77 482 aa11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ZNF230Q9UIE0 474 aaPredicted RBP11.47□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 RBMXL2O75526 392 aaKnown RBP11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 OR9G9P0C7N8 305 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 T-ENOLP0DO92 83 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 CBLN1P23435 193 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 FAM209BQ5JX69 171 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 SIGIRRQ6IA17 410 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 STPG3Q8N7X2 389 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ZNF383Q8NA42 475 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 KCNG3Q8TAE7 436 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 SETD6Q8TBK2 473 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 Q96M66 194 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 CHMP1AQ9HD42 196 aaPredicted RBP11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 ZNF221Q9UK13 617 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 POMPQ9Y244 141 aa11.46□□□□□ -0.57
NEDD8-MDP1-204ENST00000605847 LGALS9O00182 355 aa11.45□□□□□ -0.58
NEDD8-MDP1-204ENST00000605847 ITGB1BP1O14713 200 aa11.45□□□□□ -0.58
NEDD8-MDP1-204ENST00000605847 GGCTO75223 188 aaKnown RBP11.45□□□□□ -0.58
NEDD8-MDP1-204ENST00000605847 CEACAM6P40199 344 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms