RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZNF354AO60765 605 aaPredicted RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 HYPMO75409 117 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 HBZP02008 142 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 H1F0P07305 194 aaKnown RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 PRSS56P0CW18 603 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 ERGP11308 486 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 CCL5P13501 91 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 GALR1P47211 349 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 GNG5P63218 68 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 NTHL1P78549 312 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF266Q14584 549 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 IAH1Q2TAA2 248 aaPredicted RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 UBE2NLQ5JXB2 153 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 C1orf195Q5TG92 126 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 UFSP1Q6NVU6 142 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 PARM1Q6UWI2 310 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 ADAMTSL5Q6ZMM2 481 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 PRR22Q8IZ63 422 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF101Q8IZC7 436 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TCEANCQ8N8B7 351 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TEX45Q8NA69 505 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 OR4D11Q8NGI4 311 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 MRPL24Q96A35 216 aaKnown RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 ZMYND19Q96E35 227 aaPredicted RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TVP23CQ96ET8 276 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 PGLYRP3Q96LB9 341 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 TBL1YQ9BQ87 522 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 EIF5A2Q9GZV4 153 aaKnown RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF703Q9H7S9 590 aaPredicted RBP4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 RALGAPA2Q2PPJ7 1873 aa4.21□□□□□ -1.74
SPTBN1-206ENST00000602898 DSPPQ9NZW4 1301 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 ODAMA1E959 279 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 K7EMT4 169 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 GAPDHSO14556 408 aaPredicted RBP4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 CHEK1O14757 476 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 P2RX6O15547 441 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 ZG16O60844 167 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 PLAUP00749 431 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 TSPOP30536 169 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 AMTP48728 403 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 PTH2RP49190 550 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 HINT1P49773 126 aaPredicted RBP4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 P2RX1P51575 399 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 TGFBR3Q03167 851 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 HIST3H3Q16695 136 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 LRRC37A5PQ49AS3 106 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 ACSF3Q4G176 576 aaPredicted RBP4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 C12orf73Q69YU5 71 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 AMMECR1LQ6DCA0 310 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 LCN10Q6JVE6 187 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 COMMD6Q7Z4G1 85 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 ZADH2Q8N4Q0 377 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 ZNF485Q8NCK3 441 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 OR51A2Q8NGJ7 313 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 OR6K6Q8NGW6 343 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 PSMF1Q92530 271 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 PYGO2Q9BRQ0 406 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 RNASE7Q9H1E1 156 aaKnown RBP4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 BOKQ9UMX3 212 aaPredicted RBP4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 KLF12Q9Y4X4 402 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 TTC3P53804 2025 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 TRAV38-1A0A0B4J264 116 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 F5H5K5 113 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 HMGB3O15347 200 aaKnown RBP4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 IL3P08700 152 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 CTSEP14091 401 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 CD99P14209 185 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 RPS4Y1P22090 263 aaKnown RBP4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 FAM27E3Q08E93 113 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 LRP11Q86VZ4 500 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 HOGA1Q86XE5 327 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 OSR2Q8N2R0 312 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 METTL27Q8N6F8 245 aaPredicted RBP4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 FGFBP3Q8TAT2 258 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 VN1R17PQ8TDU5 208 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 BLNKQ8WV28 456 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 RNF183Q96D59 192 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 C20orf173Q96LM9 149 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 FOXC2Q99958 501 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 SMIM3Q9BZL3 60 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 DPY30Q9C005 99 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 PCTPQ9UKL6 214 aa4.2□□□□□ -1.74
SPTBN1-206ENST00000602898 TICRRQ7Z2Z1 1910 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 NYNRINQ9P2P1 1898 aaKnown RBP4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 DAPL1A0PJW8 107 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 TSPAN11A1L157 253 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 VWC2LB2RUY7 222 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 ERI3O43414 337 aaKnown RBP4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 PSG2P11465 335 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 GNG4P50150 75 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 SLC25A1P53007 311 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 RPL8P62917 257 aaKnown RBP4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 RPL38P63173 70 aaKnown RBP4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 FMODQ06828 376 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 FOXF1Q12946 379 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 MIDNQ504T8 468 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 SPATA45Q537H7 98 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 ASPHD1Q5U4P2 390 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 C1orf174Q8IYL3 243 aa4.19□□□□□ -1.74
SPTBN1-206ENST00000602898 LRRC25Q8N386 305 aaPredicted RBP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms