RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 ZNF833PQ6ZTB9 187 aa16.56■□□□□ 0.24
PNKP-215ENST00000600910 SLC38A6Q8IZM9 456 aa16.56■□□□□ 0.24
PNKP-215ENST00000600910 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.56■□□□□ 0.24
PNKP-215ENST00000600910 S1PR3Q99500 378 aa16.56■□□□□ 0.24
PNKP-215ENST00000600910 GAB2Q9UQC2 676 aa16.56■□□□□ 0.24
PNKP-215ENST00000600910 ANK3Q12955 4377 aaKnown RBP16.55■□□□□ 0.24
PNKP-215ENST00000600910 A0A0U1RQK1 487 aa16.55■□□□□ 0.24
PNKP-215ENST00000600910 DYNAPQ8N1N2 210 aa16.55■□□□□ 0.24
PNKP-215ENST00000600910 RTN4IP1Q8WWV3 396 aaPredicted RBP16.55■□□□□ 0.24
PNKP-215ENST00000600910 C22orf15Q8WYQ4 148 aa16.55■□□□□ 0.24
PNKP-215ENST00000600910 MALSU1Q96EH3 234 aa16.55■□□□□ 0.24
PNKP-215ENST00000600910 SLC25A21Q9BQT8 299 aaPredicted RBP16.55■□□□□ 0.24
PNKP-215ENST00000600910 RSRP1Q9BUV0 290 aa16.55■□□□□ 0.24
PNKP-215ENST00000600910 FAM240BA0A1B0GVZ2 78 aa16.54■□□□□ 0.24
PNKP-215ENST00000600910 NDUFB6O95139 128 aa16.54■□□□□ 0.24
PNKP-215ENST00000600910 PI3P19957 117 aa16.54■□□□□ 0.24
PNKP-215ENST00000600910 SURF2Q15527 256 aaPredicted RBP16.54■□□□□ 0.24
PNKP-215ENST00000600910 BCL6BQ8N143 479 aaPredicted RBP16.54■□□□□ 0.24
PNKP-215ENST00000600910 ZFAND1Q8TCF1 268 aa16.54■□□□□ 0.24
PNKP-215ENST00000600910 DPAGT1Q9H3H5 408 aa16.54■□□□□ 0.24
PNKP-215ENST00000600910 GPR132Q9UNW8 380 aa16.54■□□□□ 0.24
PNKP-215ENST00000600910 VSIG4Q9Y279 399 aa16.54■□□□□ 0.24
PNKP-215ENST00000600910 HIVEP2P31629 2446 aa16.54■□□□□ 0.24
PNKP-215ENST00000600910 M0R1X1 148 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 GPR31O00270 319 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 TNFSF12O43508 249 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 GAPDHP04406 335 aaKnown RBP16.53■□□□□ 0.24
PNKP-215ENST00000600910 MSMO1Q15800 293 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 PHLDA2Q53GA4 152 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 PLA1AQ53H76 456 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 FAM71F2Q6NXP2 309 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 C9orf139Q6ZV77 190 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 TGIF2LXQ8IUE1 241 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 DRAXINQ8NBI3 349 aaPredicted RBP16.53■□□□□ 0.24
PNKP-215ENST00000600910 BVESQ8NE79 360 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 ENKURQ8TC29 256 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 AKR1E2Q96JD6 320 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 GPHA2Q96T91 129 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 FAM96BQ9Y3D0 163 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 ZFHX3Q15911 3703 aa16.53■□□□□ 0.24
PNKP-215ENST00000600910 ZNF816Q0VGE8 651 aaPredicted RBP16.52■□□□□ 0.24
PNKP-215ENST00000600910 NRARPQ7Z6K4 114 aa16.52■□□□□ 0.24
PNKP-215ENST00000600910 CMTM1Q8IZ96 169 aa16.52■□□□□ 0.24
PNKP-215ENST00000600910 ZBTB34Q8NCN2 500 aa16.52■□□□□ 0.24
PNKP-215ENST00000600910 SCGB3A2Q96PL1 93 aa16.52■□□□□ 0.24
PNKP-215ENST00000600910 BEX2Q9BXY8 128 aa16.52■□□□□ 0.24
PNKP-215ENST00000600910 C5orf66Q9H5L9 145 aa16.52■□□□□ 0.24
PNKP-215ENST00000600910 INAFM1C9JVW0 142 aa16.52■□□□□ 0.23
PNKP-215ENST00000600910 TCRBP04435 133 aa16.52■□□□□ 0.23
PNKP-215ENST00000600910 CTSDP07339 412 aaPredicted RBP16.52■□□□□ 0.23
PNKP-215ENST00000600910 LINC00205P59089 165 aa16.52■□□□□ 0.23
PNKP-215ENST00000600910 ABCA11PQ4W5N1 156 aa16.52■□□□□ 0.23
PNKP-215ENST00000600910 ZDHHC22Q8N966 263 aa16.52■□□□□ 0.23
PNKP-215ENST00000600910 ZNF486Q96H40 463 aaPredicted RBP16.52■□□□□ 0.23
PNKP-215ENST00000600910 RTBDNQ9BSG5 229 aaPredicted RBP16.52■□□□□ 0.23
PNKP-215ENST00000600910 MRPL20Q9BYC9 149 aaKnown RBP16.52■□□□□ 0.23
PNKP-215ENST00000600910 OCEL1Q9H607 264 aa16.52■□□□□ 0.23
PNKP-215ENST00000600910 SLC2A9Q9NRM0 540 aa16.52■□□□□ 0.23
PNKP-215ENST00000600910 CDC42EP3Q9UKI2 254 aa16.52■□□□□ 0.23
PNKP-215ENST00000600910 C14orf166Q9Y224 244 aaKnown RBP16.52■□□□□ 0.23
PNKP-215ENST00000600910 MXRA5Q9NR99 2828 aa16.51■□□□□ 0.23
PNKP-215ENST00000600910 IGHV1-3A0A0C4DH29 117 aa16.51■□□□□ 0.23
PNKP-215ENST00000600910 A0A1W2PPI3 338 aa16.51■□□□□ 0.23
PNKP-215ENST00000600910 OOSP1A8MZH6 123 aa16.51■□□□□ 0.23
PNKP-215ENST00000600910 TXNL1O43396 289 aa16.51■□□□□ 0.23
PNKP-215ENST00000600910 PIGPP57054 158 aa16.51■□□□□ 0.23
PNKP-215ENST00000600910 EIF4EBP1Q13541 118 aaPredicted RBP16.51■□□□□ 0.23
PNKP-215ENST00000600910 FLVCR2Q9UPI3 526 aa16.51■□□□□ 0.23
PNKP-215ENST00000600910 PGLYRP1O75594 196 aaPredicted RBP16.5■□□□□ 0.23
PNKP-215ENST00000600910 FBP1P09467 338 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 CT45A6P0DMU7 189 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 CT45A5P0DMU8 189 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 CT45A7P0DMV0 189 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 DUTP33316 252 aaKnown RBP16.5■□□□□ 0.23
PNKP-215ENST00000600910 CCDC144NLQ6NUI1 221 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 OR8H3Q8N146 312 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 HSD17B10Q99714 261 aaKnown RBP16.5■□□□□ 0.23
PNKP-215ENST00000600910 NABP2Q9BQ15 211 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 C20orf85Q9H1P6 137 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 COPZ2Q9P299 210 aa16.5■□□□□ 0.23
PNKP-215ENST00000600910 MDFIC2A0A1B0GVS7 189 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 LINC00473A8K010 186 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 RLN1P04808 185 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 S100GP29377 79 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 RPL30P62888 115 aaKnown RBP16.49■□□□□ 0.23
PNKP-215ENST00000600910 DEFB112Q30KQ8 113 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 GLDNQ6ZMI3 551 aaPredicted RBP16.49■□□□□ 0.23
PNKP-215ENST00000600910 TMED4Q7Z7H5 227 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 MOB3BQ86TA1 216 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 ADAD2Q8NCV1 583 aaKnown RBP16.49■□□□□ 0.23
PNKP-215ENST00000600910 DUSP18Q8NEJ0 188 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 MEGF9Q9H1U4 602 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 NUDT15Q9NV35 164 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 NAV3Q8IVL0 2385 aa16.49■□□□□ 0.23
PNKP-215ENST00000600910 TIMM23O14925 209 aa16.48■□□□□ 0.23
PNKP-215ENST00000600910 ARPC1BO15143 372 aaKnown RBP16.48■□□□□ 0.23
PNKP-215ENST00000600910 PTTG1O95997 202 aa16.48■□□□□ 0.23
PNKP-215ENST00000600910 THBS3P49746 956 aa16.48■□□□□ 0.23
PNKP-215ENST00000600910 RND3P61587 244 aa16.48■□□□□ 0.23
PNKP-215ENST00000600910 RGS21Q2M5E4 152 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms