RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 HSD17B6O14756 317 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 TIMM23O14925 209 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 DHFRP00374 187 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 NFYBP25208 207 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 ECI1P42126 302 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 LOXL3P58215 753 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 RELBQ01201 579 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 SRSF4Q08170 494 aaKnown RBP10.29□□□□□ -0.76
UPF1-208ENST00000600012 LY6G5BQ8NDX9 201 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 C8orf46Q8TAG6 207 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 SSMEM1Q8WWF3 244 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 SEC22CQ9BRL7 303 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 RTBDNQ9BSG5 229 aaPredicted RBP10.29□□□□□ -0.76
UPF1-208ENST00000600012 SLC5A7Q9GZV3 580 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 C5orf66Q9H5L9 145 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 RAB9BQ9NP90 201 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 CCL28Q9NRJ3 127 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 GFOD1Q9NXC2 390 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 C14orf166Q9Y224 244 aaKnown RBP10.29□□□□□ -0.76
UPF1-208ENST00000600012 VWFP04275 2813 aa10.29□□□□□ -0.76
UPF1-208ENST00000600012 ST8SIA5O15466 376 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 TOX4O94842 621 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 CTSDP07339 412 aaPredicted RBP10.28□□□□□ -0.76
UPF1-208ENST00000600012 OR8U9P0C7N5 309 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 MMP9P14780 707 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 MECP2P51608 486 aaKnown RBP10.28□□□□□ -0.76
UPF1-208ENST00000600012 LUMP51884 338 aaPredicted RBP10.28□□□□□ -0.76
UPF1-208ENST00000600012 UCP3P55916 312 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 SURF2Q15527 256 aaPredicted RBP10.28□□□□□ -0.76
UPF1-208ENST00000600012 MORN2Q502X0 79 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 PHLDA2Q53GA4 152 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 METTL11BQ5VVY1 283 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 OR52B4Q8NGK2 314 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 OR8U1Q8NH10 309 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 TMEM230Q96A57 120 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 SCGB3A2Q96PL1 93 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 TBX15Q96SF7 602 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 RSRP1Q9BUV0 290 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 TOLLIPQ9H0E2 274 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 LINC00574Q9H8X3 128 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 ZNF221Q9UK13 617 aa10.28□□□□□ -0.76
UPF1-208ENST00000600012 RBM7Q9Y580 266 aaKnown RBP10.28□□□□□ -0.76
UPF1-208ENST00000600012 CENPVL3A0A0U1RRI6 287 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 A0A1W2PPE3 182 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 SLC31A2O15432 143 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 YPEL1O60688 119 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 OR4E1P0C645 316 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 AKR1C4P17516 323 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 GNG10P50151 68 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 DLX1P56177 255 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 PRB3Q04118 309 aaPredicted RBP10.27□□□□□ -0.77
UPF1-208ENST00000600012 CBX3Q13185 183 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 TMEM30BQ3MIR4 351 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 C4orf46Q504U0 113 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 HEPN1Q6WQI6 88 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 ZNF818PQ6ZRF7 136 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 SLC25A42Q86VD7 318 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 SLC38A6Q8IZM9 456 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 ZFAND1Q8TCF1 268 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 YPEL2Q96QA6 119 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 OR2D2Q9H210 308 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 RNF150Q9ULK6 438 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 PSG11Q9UQ72 335 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 RNF114Q9Y508 228 aa10.27□□□□□ -0.77
UPF1-208ENST00000600012 IGHV1-69DA0A0B4J2H0 117 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 A0A1W2PPH5 198 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 C7orf66A4D0T2 115 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 C17orf98A8MV24 154 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 PRAF2O60831 178 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 RGS11O94810 467 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 IGHV1-69P01742 117 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 IL5P05113 134 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 IGHV1-8P0DP01 117 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 GNRHRP30968 328 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 BCAP31P51572 246 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 PIGPP57054 158 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 TAS2R31P59538 309 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 PPP1R1AQ13522 171 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 C11orf91Q3C1V1 193 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 ABCA11PQ4W5N1 156 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 GLDNQ6ZMI3 551 aaPredicted RBP10.26□□□□□ -0.77
UPF1-208ENST00000600012 CADM3Q8N126 398 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 C11orf42Q8N5U0 333 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 ZNF439Q8NDP4 499 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 OR2AK2Q8NG84 335 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 OR10A7Q8NGE5 316 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 OR52M1Q8NGK5 317 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 EDARADDQ8WWZ3 215 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 ABHD14BQ96IU4 210 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 GPHA2Q96T91 129 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 SIRPDQ9H106 197 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 SLC2A9Q9NRM0 540 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 ZNRD1Q9P1U0 126 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 SESN1Q9Y6P5 492 aa10.26□□□□□ -0.77
UPF1-208ENST00000600012 GPR31O00270 319 aa10.25□□□□□ -0.77
UPF1-208ENST00000600012 TNFSF12O43508 249 aa10.25□□□□□ -0.77
UPF1-208ENST00000600012 GPR137BO60478 399 aa10.25□□□□□ -0.77
UPF1-208ENST00000600012 IGLV2-14P01704 120 aa10.25□□□□□ -0.77
UPF1-208ENST00000600012 VAMP1P23763 118 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms