RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RAB2BQ8WUD1 216 aa13.14□□□□□ -0.31
PNKP-210ENST00000597965 RITA1Q96K30 269 aa13.14□□□□□ -0.31
PNKP-210ENST00000597965 LALBAP00709 142 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 CD1AP06126 327 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 OR3A3P47888 321 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 CX3CL1P78423 397 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 C19orf54Q5BKX5 351 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 SIGIRRQ6IA17 410 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 IL1F10Q8WWZ1 152 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 ARPC1AQ92747 370 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 DERL3Q96Q80 235 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 TSC22D3Q99576 134 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 BCL7BQ9BQE9 202 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 ALX4Q9H161 411 aaPredicted RBP13.13□□□□□ -0.31
PNKP-210ENST00000597965 SLC23A1Q9UHI7 598 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 STUB1Q9UNE7 303 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 WASHC3Q9Y3C0 194 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 NUBP2Q9Y5Y2 271 aa13.13□□□□□ -0.31
PNKP-210ENST00000597965 IGHV4OR15-8A0A075B7B6 117 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 A0A087WW49 117 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 A0A1W2PPK0 400 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 H7C2Y5 167 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 HSPA12AO43301 675 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 NOL3O60936 208 aaKnown RBP13.12□□□□□ -0.31
PNKP-210ENST00000597965 GABARAPO95166 117 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 CD36P16671 472 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 HMGN3Q15651 99 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 CTF1Q16619 201 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 FAM131AQ6UXB0 335 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 ZNF562Q6V9R5 426 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 PPP1R27Q86WC6 154 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 SGPP2Q8IWX5 399 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 EDARADDQ8WWZ3 215 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 FAM46BQ96A09 425 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 MGLLQ99685 303 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 TM2D3Q9BRN9 247 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 MND1Q9BWT6 205 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 IFI27L2Q9H2X8 130 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 RIMS4Q9H426 269 aaPredicted RBP13.12□□□□□ -0.31
PNKP-210ENST00000597965 FBXL15Q9H469 300 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 TPSG1Q9NRR2 321 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 A3GALT2U3KPV4 340 aa13.12□□□□□ -0.31
PNKP-210ENST00000597965 HUWE1Q7Z6Z7 4374 aaKnown RBP13.11□□□□□ -0.31
PNKP-210ENST00000597965 A8MZ25 164 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 ITGB1BP1O14713 200 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 SLC22A1O15245 554 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 SOX15O60248 233 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 ZP3P21754 424 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 TPPP2P59282 170 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 SPHARQ15513 63 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 MOGAT2Q3SYC2 334 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 UNQ5815/PRO19632Q6UWF5 114 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 ZFP41Q8N8Y5 198 aa13.11□□□□□ -0.31
PNKP-210ENST00000597965 RBMXL1Q96E39 390 aaKnown RBP13.11□□□□□ -0.31
PNKP-210ENST00000597965 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
PNKP-210ENST00000597965 RANGRFQ9HD47 186 aaPredicted RBP13.11□□□□□ -0.31
PNKP-210ENST00000597965 LCE6AA0A183 80 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 MYL12BO14950 172 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 SPDEFO95238 335 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 CELP19835 753 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 NDPQ00604 133 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 MED22Q15528 200 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 SRSF7Q16629 238 aaKnown RBP eCLIP13.1□□□□□ -0.31
PNKP-210ENST00000597965 GLT8D1Q68CQ7 371 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 ZNF485Q8NCK3 441 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 OR5AN1Q8NGI8 311 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 KCNG3Q8TAE7 436 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 TSNAXQ99598 290 aaKnown RBP13.1□□□□□ -0.31
PNKP-210ENST00000597965 TMEM59Q9BXS4 323 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 FBXO7Q9Y3I1 522 aa13.1□□□□□ -0.31
PNKP-210ENST00000597965 A0A0G2JLM5 398 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 H0YJW9 148 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 H3BUA1 57 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 ST8SIA5O15466 376 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 CT45A6P0DMU7 189 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 CT45A5P0DMU8 189 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 CT45A7P0DMV0 189 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 IGHV4-30-4P0DP06 118 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 ZBTB25P24278 435 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 WNT4P56705 351 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 RHOVQ96L33 236 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 SULT4A1Q9BR01 284 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 RSRP1Q9BUV0 290 aa13.09□□□□□ -0.31
PNKP-210ENST00000597965 METTL1Q9UBP6 276 aaKnown RBP13.09□□□□□ -0.31
PNKP-210ENST00000597965 PNMA8CA0A1B0GUJ8 204 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 C13orf42A0A1B0GVH6 325 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 H0Y980 276 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 NAPSAO96009 420 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 IGLV1-51P01701 117 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 IGHV3-11P01762 117 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 TRGV3P03979 118 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 HSMCR30P0CW71 290 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 CPEP16870 476 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 GADD45AP24522 165 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 RPS27AP62979 156 aaKnown RBP13.08□□□□□ -0.32
PNKP-210ENST00000597965 MLLT11Q13015 90 aaPredicted RBP13.08□□□□□ -0.32
PNKP-210ENST00000597965 SPCS2Q15005 226 aa13.08□□□□□ -0.32
PNKP-210ENST00000597965 SSX1Q16384 188 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms