RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 OR5H8P0DN80 308 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 NAT1P18440 290 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 LUMP51884 338 aaPredicted RBP11.47□□□□□ -0.57
LIG1-208ENST00000595758 CDK10Q15131 360 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.47□□□□□ -0.57
LIG1-208ENST00000595758 LINC01006Q8NI28 216 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 ABHD1Q96SE0 405 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 OR2D2Q9H210 308 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 C16orf95Q9H693 158 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 GAB2Q9UQC2 676 aa11.47□□□□□ -0.57
LIG1-208ENST00000595758 M0QZK8 103 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 M0R1X1 148 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 PROP1O75360 226 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 TUSC2O75896 110 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 FCGR2CP31995 323 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 TAS2R46P59540 309 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 BLCAPP62952 87 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 Q8N6K4 173 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 PRSS22Q9GZN4 317 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 MMP27Q9H306 513 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 MOB4Q9Y3A3 225 aa11.46□□□□□ -0.57
LIG1-208ENST00000595758 TENM1Q9UKZ4 2725 aa11.46□□□□□ -0.58
LIG1-208ENST00000595758 HLA-DMAP28067 261 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 TNFSF8P32971 234 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 MC5RP33032 325 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 RCVRNP35243 200 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 RFX2P48378 723 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 RNASE12Q5GAN4 147 aaKnown RBP11.45□□□□□ -0.58
LIG1-208ENST00000595758 GLDNQ6ZMI3 551 aaPredicted RBP11.45□□□□□ -0.58
LIG1-208ENST00000595758 LYSMD2Q8IV50 215 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 C3orf56Q8N813 242 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 DRAXINQ8NBI3 349 aaPredicted RBP11.45□□□□□ -0.58
LIG1-208ENST00000595758 OR5H2Q8NGV7 314 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 OR52I2Q8NH67 350 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 OR2T6Q8NHC8 308 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 FCAMRQ8WWV6 532 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 ZNF702PQ9H963 129 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 SDHAF2Q9NX18 166 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 EHFQ9NZC4 300 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 RABL2AQ9UBK7 228 aaPredicted RBP11.45□□□□□ -0.58
LIG1-208ENST00000595758 RABL2BQ9UNT1 228 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 SIGLEC9Q9Y336 463 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 RNF114Q9Y508 228 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 A3GALT2U3KPV4 340 aa11.45□□□□□ -0.58
LIG1-208ENST00000595758 IGKV1D-13A0A0B4J2D9 117 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 OR5H14A6NHG9 310 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 NCBP2LA6PVI3 153 aaKnown RBP11.44□□□□□ -0.58
LIG1-208ENST00000595758 H0YJW9 148 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 SLC22A5O76082 557 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 PMP2P02689 132 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 AMY1AP04745 511 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 AMY2AP04746 511 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 IGKV1-13P0DP09 117 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 AADACP22760 399 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 MRPS10P82664 201 aaKnown RBP11.44□□□□□ -0.58
LIG1-208ENST00000595758 IL18Q14116 193 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 ABCA11PQ4W5N1 156 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 FOXB2Q5VYV0 432 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 PYHIN1Q6K0P9 492 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 FAM131AQ6UXB0 335 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 OVCH2Q7RTZ1 564 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 Q8N2B8 174 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 OR8H1Q8NGG4 311 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 OR5AN1Q8NGI8 311 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 GIMAP1Q8WWP7 306 aa11.44□□□□□ -0.58
LIG1-208ENST00000595758 RBMXL1Q96E39 390 aaKnown RBP11.44□□□□□ -0.58
LIG1-208ENST00000595758 FABP12A6NFH5 140 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 GABARAPH6UMI1 98 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 H7C2Y5 167 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 FGF16O43320 207 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 RBBP9O75884 186 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 PPYP01298 95 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 S100A5P33763 92 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 HRH1P35367 487 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 LINC00205P59089 165 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 ACTBP60709 375 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 DYRK1AQ13627 763 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 ARSJQ5FYB0 599 aaPredicted RBP11.43□□□□□ -0.58
LIG1-208ENST00000595758 C11orf88Q6PI97 169 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 Q6ZS46 218 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 ZNF645Q8N7E2 425 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 C5orf56Q8N8D9 126 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 ZNF383Q8NA42 475 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 C5orf30Q96GV9 206 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 PLSCR3Q9NRY6 295 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 KLK11Q9UBX7 282 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 MTFP1Q9UDX5 166 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 WASHC3Q9Y3C0 194 aa11.43□□□□□ -0.58
LIG1-208ENST00000595758 SH2D7A6NKC9 451 aaPredicted RBP11.42□□□□□ -0.58
LIG1-208ENST00000595758 HAX1O00165 279 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 APOA2P02652 100 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 THBS3P49746 956 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 F2RL1P55085 397 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 PROK1P58294 105 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 HERV-K104P61576 105 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 DGCR2P98153 550 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 C9orf152Q5JTZ5 239 aa11.42□□□□□ -0.58
LIG1-208ENST00000595758 DHRS11Q6UWP2 260 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms