RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 AKR1E2Q96JD6 320 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 CMTM3Q96MX0 182 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 S1PR3Q99500 378 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 BCL7BQ9BQE9 202 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 MIXL1Q9H2W2 232 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 ZNF221Q9UK13 617 aa10.96□□□□□ -0.65
SHKBP1-207ENST00000595631 CCDC160A6NGH7 325 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 NCBP2LA6PVI3 153 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 CTDSP2O14595 271 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 DIRAS3O95661 229 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 CNTFRP26992 372 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 SOX6P35712 828 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 VDAC2P45880 294 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 ARPC4P59998 168 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 RNASE12Q5GAN4 147 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 FAM71F2Q6NXP2 309 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 C11orf88Q6PI97 169 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 SHISA2Q6UWI4 295 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 LAX1Q8IWV1 398 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 C11orf44Q8N8P7 122 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 RBM38Q9H0Z9 239 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 IFT46Q9NQC8 304 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 PLSCR3Q9NRY6 295 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 SDHAF2Q9NX18 166 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 CCDC59Q9P031 241 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 EXTL2Q9UBQ6 330 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 DNHD1Q96M86 4753 aa10.95□□□□□ -0.66
SHKBP1-207ENST00000595631 ANK2Q01484 3957 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 IGKV1D-13A0A0B4J2D9 117 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 H0YJW9 148 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 M0R1X1 148 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 IGKV1-13P0DP09 117 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 PRSS3P35030 304 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 Q8N9W7 124 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 ZNF383Q8NA42 475 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 CITED1Q99966 193 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 ANAPC10Q9UM13 185 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 RBM7Q9Y580 266 aaKnown RBP10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 PLXNB1O43157 2135 aa10.94□□□□□ -0.66
SHKBP1-207ENST00000595631 SMIM31A0A1B0GVY4 71 aa10.93□□□□□ -0.66
SHKBP1-207ENST00000595631 M0QZK8 103 aa10.93□□□□□ -0.66
SHKBP1-207ENST00000595631 RGS5O15539 181 aa10.93□□□□□ -0.66
SHKBP1-207ENST00000595631 CTXN2P0C2S0 81 aa10.93□□□□□ -0.66
SHKBP1-207ENST00000595631 CBX5P45973 191 aa10.93□□□□□ -0.66
SHKBP1-207ENST00000595631 ACTBP60709 375 aa10.93□□□□□ -0.66
SHKBP1-207ENST00000595631 GPX8Q8TED1 209 aa10.93□□□□□ -0.66
SHKBP1-207ENST00000595631 OR2W1Q9Y3N9 320 aa10.93□□□□□ -0.66
SHKBP1-207ENST00000595631 OR5H14A6NHG9 310 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 LINC01548A6NM66 108 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 H7C2Y5 167 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 FGF16O43320 207 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 TUSC2O75896 110 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 AADACP22760 399 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 FCGR2CP31995 323 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 MMDQ15546 238 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 C10orf99Q6UWK7 81 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 OR5AN1Q8NGI8 311 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 DCUN1D5Q9BTE7 237 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 SLIRPQ9GZT3 109 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 WNT10AQ9GZT5 417 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 GHITMQ9H3K2 345 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 LINC00527Q9UJ94 153 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 WASHC3Q9Y3C0 194 aa10.92□□□□□ -0.66
SHKBP1-207ENST00000595631 PEX14O75381 377 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 IGLV2-14P01704 120 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 PMP2P02689 132 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 OR5H8P0DN80 308 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 NAT1P18440 290 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 LUMP51884 338 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 CDK10Q15131 360 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 FAM71E2Q8N5Q1 922 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 OR5AP2Q8NGF4 316 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 NOL4LQ96MY1 436 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 ABHD1Q96SE0 405 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 GPHA2Q96T91 129 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 HSPB9Q9BQS6 159 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 C6orf62Q9GZU0 229 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 LIN7CQ9NUP9 197 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 NECAP2Q9NVZ3 263 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 RSL24D1Q9UHA3 163 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 GAB2Q9UQC2 676 aa10.91□□□□□ -0.66
SHKBP1-207ENST00000595631 NBR2O15453 112 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 IGKV1-16P04430 117 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 CD28P10747 220 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 HLA-DMAP28067 261 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 RFX2P48378 723 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 FXYD4P59646 89 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 SLC35E3Q7Z769 313 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 LYSMD2Q8IV50 215 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 ZNF645Q8N7E2 425 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 OR8H1Q8NGG4 311 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 OR52I2Q8NH67 350 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 SECTM1Q8WVN6 248 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 RASL11BQ9BPW5 248 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 SCPEP1Q9HB40 452 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 SLC35D1Q9NTN3 355 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 EHFQ9NZC4 300 aa10.9□□□□□ -0.66
SHKBP1-207ENST00000595631 ADAM30Q9UKF2 790 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms