RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	FCGR2C	P31995	323 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	TNFSF8	P32971	234 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	COMP	P49747	757 aa	Predicted RBP	18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	LINC00205	P59089	165 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	BLCAP	P62952	87 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	EBI3	Q14213	229 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	CDK10	Q15131	360 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	C16orf82	Q7Z2V1	217 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	OR2T10	Q8NGZ9	312 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	SDHAF2	Q9NX18	166 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	SIGLEC9	Q9Y336	463 aa		18.27	■□□□□ 0.52
PNKP-205	ENST00000595081	IGKV1D-13	A0A0B4J2D9	117 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081		M0R1X1	148 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	TUSC2	O75896	110 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	TPPP	O94811	219 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	PMP2	P02689	132 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	IGKV1-13	P0DP09	117 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	HLA-DMA	P28067	261 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	RFX2	P48378	723 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	LUM	P51884	338 aa	Predicted RBP	18.26	■□□□□ 0.51
PNKP-205	ENST00000595081		Q6ZS46	218 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	LYSMD2	Q8IV50	215 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081		Q8N6K4	173 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	LINC01006	Q8NI28	216 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	AKR1E2	Q96JD6	320 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	MMP27	Q9H306	513 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	RANBP3	Q9H6Z4	567 aa	Predicted RBP	18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	BEX1	Q9HBH7	125 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	EHF	Q9NZC4	300 aa		18.26	■□□□□ 0.51
PNKP-205	ENST00000595081	SH2D7	A6NKC9	451 aa	Predicted RBP	18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	MOS	P00540	346 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	AMY1A	P04745	511 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	AMY2A	P04746	511 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	AADAC	P22760	399 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	RCVRN	P35243	200 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	TAS2R46	P59540	309 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	DGCR2	P98153	550 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	IL18	Q14116	193 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	FAM131A	Q6UXB0	335 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	C12orf54	Q6X4T0	127 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	OR5H2	Q8NGV7	314 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	C15orf40	Q8WUR7	153 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	C16orf95	Q9H693	158 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	ZNF702P	Q9H963	129 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	KLK11	Q9UBX7	282 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	MOB4	Q9Y3A3	225 aa		18.25	■□□□□ 0.51
PNKP-205	ENST00000595081	CLPSL1	A2RUU4	121 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081		H0YJW9	148 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	HRH1	P35367	487 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	PYHIN1	Q6K0P9	492 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	ZNF383	Q8NA42	475 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	FCAMR	Q8WWV6	532 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	RITA1	Q96K30	269 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	GAB2	Q9UQC2	676 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	MMP24	Q9Y5R2	645 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	A3GALT2	U3KPV4	340 aa		18.24	■□□□□ 0.51
PNKP-205	ENST00000595081	ABCA11P	Q4W5N1	156 aa		18.23	■□□□□ 0.51
PNKP-205	ENST00000595081	OVCH2	Q7RTZ1	564 aa		18.23	■□□□□ 0.51
PNKP-205	ENST00000595081	SPATA3	Q8NHX4	192 aa		18.23	■□□□□ 0.51
PNKP-205	ENST00000595081	PRSS22	Q9GZN4	317 aa		18.23	■□□□□ 0.51
PNKP-205	ENST00000595081	RNF114	Q9Y508	228 aa		18.23	■□□□□ 0.51
PNKP-205	ENST00000595081	DNHD1	Q96M86	4753 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	OR5H14	A6NHG9	310 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	NCBP2L	A6PVI3	153 aa	Known RBP	18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	GABARAP	H6UMI1	98 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	PPY	P01298	95 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	DYRK1A	Q13627	763 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	ZNF645	Q8N7E2	425 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	C5orf56	Q8N8D9	126 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	OR5AN1	Q8NGI8	311 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	OR2T6	Q8NHC8	308 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	SOST	Q9BQB4	213 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	PLSCR3	Q9NRY6	295 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081	MTFP1	Q9UDX5	166 aa		18.22	■□□□□ 0.51
PNKP-205	ENST00000595081		A0A1B0GUS0	222 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	FABP12	A6NFH5	140 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081		H7C2Y5	167 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081		M0QZK8	103 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	RBBP9	O75884	186 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	IGLV2-14	P01704	120 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	S100A5	P33763	92 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	F2RL1	P55085	397 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	FXYD4	P59646	89 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	ACTB	P60709	375 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	ZNF660	Q6AZW8	331 aa	Predicted RBP	18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	C11orf88	Q6PI97	169 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081		Q8N2B8	174 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	SECTM1	Q8WVN6	248 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	GIMAP1	Q8WWP7	306 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081	WASHC3	Q9Y3C0	194 aa		18.21	■□□□□ 0.51
PNKP-205	ENST00000595081		M0QYG6	137 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	HAX1	O00165	279 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	CNTFR	P26992	372 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	MRPS10	P82664	201 aa	Known RBP	18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	TMEM95	Q3KNT9	176 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	C9orf152	Q5JTZ5	239 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	C3orf56	Q8N813	242 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	SMIM4	Q8WVI0	70 aa		18.2	■□□□□ 0.5
PNKP-205	ENST00000595081	ZNF2	Q9BSG1	426 aa	Predicted RBP	18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms