RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 WDR1O75083 606 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 TNFSF13O75888 250 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 GLI4P10075 376 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 COX5AP20674 150 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 ABCA11PQ4W5N1 156 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 PHLDA2Q53GA4 152 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 WDR31Q8NA23 367 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 SDF2L1Q9HCN8 221 aa14.43□□□□□ -0.1
SHKBP1-205ENST00000594973 GTF3C1Q12789 2109 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 ESPL1Q14674 2120 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 CNOT4O95628 575 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 SP6Q3SY56 376 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 SAPCD1Q5SSQ6 148 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 ALKBH2Q6NS38 261 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 BTNL3Q6UXE8 466 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 SEM1Q6ZVN7 128 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 WDR86Q86TI4 376 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM58AQ8N1B3 248 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 OR2C3Q8N628 320 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 RDH5Q92781 318 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 STARD4Q96DR4 205 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 PROCRQ9UNN8 238 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 SELEP16581 610 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 MPV17P39210 176 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 IL24Q13007 206 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 PSG7Q13046 419 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 MPV17LQ2QL34 196 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 Q6ZS92 163 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 TMEM170AQ8WVE7 144 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 RTL8AQ9BWD3 113 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 C11orf1Q9H5F2 150 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 PLSCR4Q9NRQ2 329 aa14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 CISD1Q9NZ45 108 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-205ENST00000594973 NBEAQ8NFP9 2946 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 AADACP22760 399 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 LIAT1Q6ZQX7 453 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 RPRMLQ8N4K4 120 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 RBMXL3Q8N7X1 1067 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 FZR1Q9UM11 496 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 ACACAQ13085 2346 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 J3QW42 95 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 IGKV3-15P01624 115 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 SCTP09683 121 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 GNG10P50151 68 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 LYZL2Q7Z4W2 148 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 FAM185AQ8N0U4 392 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 LGI3Q8N145 548 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 OR4D5Q8NGN0 318 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 OR11L1Q8NGX0 322 aa14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 KLF14Q8TD94 323 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 RTN4IP1Q8WWV3 396 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-205ENST00000594973 J3QT63 122 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 CDIPTO14735 213 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 NAPSAO96009 420 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 PFN1P07737 140 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 RAC2P15153 192 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 HERV-K104P61576 105 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 ARSJQ5FYB0 599 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 MRPL41Q8IXM3 137 aaKnown RBP14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 SCCPDHQ8NBX0 429 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 OR52M1Q8NGK5 317 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 PKIBQ9C010 78 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 PLK3Q9H4B4 646 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 Q9N2K0 584 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 SLC2A9Q9NRM0 540 aa14.4□□□□□ -0.1
SHKBP1-205ENST00000594973 GRPP07492 148 aa14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 OR10J1P30954 320 aa14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 FAM3BP58499 235 aaPredicted RBP14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 RAB11AP62491 216 aa14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 PMS2P11Q13670 270 aa14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 ZNF880Q6PDB4 577 aa14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 P2RX4Q99571 388 aa14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 PLEKHF2Q9H8W4 249 aa14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 FKBP11Q9NYL4 201 aa14.4□□□□□ -0.11
SHKBP1-205ENST00000594973 TRAV24A0A0B4J272 114 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 CGAP01215 116 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 PPYP01298 95 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 CECR9P0C854 216 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 FOXC1Q12948 553 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 ACOT6Q3I5F7 207 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 ZNF66Q6ZN08 573 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 C20orf204Q6ZNR8 217 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 CMTM1Q8IZ96 169 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 C1orf162Q8NEQ5 155 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 MOB3AQ96BX8 217 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 COL25A1Q9BXS0 654 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 OBP2BQ9NPH6 170 aa14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 ZNF71Q9NQZ8 489 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 POLR3KQ9Y2Y1 108 aaPredicted RBP14.39□□□□□ -0.11
SHKBP1-205ENST00000594973 ZNF154Q13106 437 aa14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 H1FOOQ8IZA3 346 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 RIMS4Q9H426 269 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 GAB2Q9UQC2 676 aa14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 RFNGQ9Y644 331 aa14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 LRP5LA4QPB2 252 aa14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 MBD3L4A6NDZ8 208 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 MBD3L3A6NE82 208 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 MBD3L5A6NJ08 208 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 MDKP21741 143 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-205ENST00000594973 FABP6P51161 128 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms