RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 C16orf54Q6UWD8 224 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 FAM214BQ7L5A3 538 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 FBXL14Q8N1E6 418 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 OR51G1Q8NGK1 321 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 CORO2AQ92828 525 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 SDSLQ96GA7 329 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 SCNM1Q9BWG6 230 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 SLC7A11Q9UPY5 501 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 FUT9Q9Y231 359 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 BSNQ9UPA5 3926 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 ZNF816-ZNF321PA0A0X1KG74 233 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 ZNF732B4DXR9 585 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 TYMSP04818 313 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 CNN1P51911 297 aaKnown RBP13.04□□□□□ -0.32
PNKP-204ENST00000594661 EWSR1Q01844 656 aaKnown RBP eCLIP13.04□□□□□ -0.32
PNKP-204ENST00000594661 WDR25Q64LD2 544 aaPredicted RBP13.04□□□□□ -0.32
PNKP-204ENST00000594661 RBMXL3Q8N7X1 1067 aaKnown RBP13.04□□□□□ -0.32
PNKP-204ENST00000594661 TMEM37Q8WXS4 190 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 Q9N2K0 584 aa13.04□□□□□ -0.32
PNKP-204ENST00000594661 PITX3O75364 302 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 NGFP01138 241 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 IGHV1-2P23083 117 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 FUT6P51993 359 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 UBE2NP61088 152 aaKnown RBP13.03□□□□□ -0.32
PNKP-204ENST00000594661 RNF151Q2KHN1 245 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 ACSF3Q4G176 576 aaPredicted RBP13.03□□□□□ -0.32
PNKP-204ENST00000594661 TPTE2P1Q5T6R2 138 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 MDP1Q86V88 176 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 CNEP1R1Q8N9A8 125 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 BOD1Q96IK1 185 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 HDHD3Q9BSH5 251 aaPredicted RBP13.03□□□□□ -0.32
PNKP-204ENST00000594661 RNF115Q9Y4L5 304 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 CTSDP07339 412 aaPredicted RBP13.03□□□□□ -0.32
PNKP-204ENST00000594661 HOXC12P31275 282 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 KIR2DL2P43627 348 aaPredicted RBP13.03□□□□□ -0.32
PNKP-204ENST00000594661 PLP2Q04941 152 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 VWA1Q6PCB0 445 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 C16orf82Q7Z2V1 217 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 CISD2Q8N5K1 135 aaKnown RBP13.03□□□□□ -0.32
PNKP-204ENST00000594661 CSTL1Q9H114 145 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 OR6C3Q9NZP0 311 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 CRIM1Q9NZV1 1036 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 ZNF581Q9P0T4 197 aa13.03□□□□□ -0.32
PNKP-204ENST00000594661 ANKRD11Q6UB99 2663 aaPredicted RBP13.02□□□□□ -0.33
PNKP-204ENST00000594661 IGKV1-12A0A0C4DH73 117 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 FAM221AA4D161 298 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 CLEC18AA5D8T8 446 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 LYZL6O75951 148 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 IGKV1D-12P01611 117 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 MMP9P14780 707 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 TDRG1Q3Y452 100 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 TOMM20LQ6UXN7 152 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 ASCL4Q6XD76 172 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 H1FOOQ8IZA3 346 aaPredicted RBP13.02□□□□□ -0.33
PNKP-204ENST00000594661 STPG4Q8N801 248 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 CLEC18CQ8NCF0 446 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 OR56B2PQ8NGI1 322 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 APOBEC3DQ96AK3 386 aaPredicted RBP13.02□□□□□ -0.33
PNKP-204ENST00000594661 P2RX4Q99571 388 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 REPIN1Q9BWE0 567 aaKnown RBP13.02□□□□□ -0.33
PNKP-204ENST00000594661 PLK3Q9H4B4 646 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 TMEM106BQ9NUM4 274 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 ATMQ13315 3056 aa13.02□□□□□ -0.33
PNKP-204ENST00000594661 IGKV1D-8A0A087WSZ0 117 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 A0A1W2PR80 420 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 ZNF850A8MQ14 1090 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 NDUFS8O00217 210 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 ST8SIA3O43173 380 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 GFRA3O60609 400 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 OR5G3P0C626 314 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 UCP3P55916 312 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 FOXF2Q12947 444 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 PIGYQ3MUY2 71 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 MYPOPQ86VE0 399 aaPredicted RBP13.01□□□□□ -0.33
PNKP-204ENST00000594661 NANOS1Q8WY41 292 aaKnown RBP13.01□□□□□ -0.33
PNKP-204ENST00000594661 GNPNAT1Q96EK6 184 aaPredicted RBP13.01□□□□□ -0.33
PNKP-204ENST00000594661 MAGT1Q9H0U3 335 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 C11orf1Q9H5F2 150 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 DKK4Q9UBT3 224 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 APC2O95996 2303 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 MAP1LC3B2A6NCE7 125 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 BCL2P10415 239 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 GALR1P47211 349 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 ERVS71-1P61550 626 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 OSR2Q8N2R0 312 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 LRTM2Q8N967 370 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 OR5T1Q8NG75 326 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 CIB3Q96Q77 187 aaPredicted RBP13.01□□□□□ -0.33
PNKP-204ENST00000594661 VAMP8Q9BV40 100 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 MAP1LC3BQ9GZQ8 125 aa13.01□□□□□ -0.33
PNKP-204ENST00000594661 CBY3A6NI87 242 aa13□□□□□ -0.33
PNKP-204ENST00000594661 HRASP01112 189 aa13□□□□□ -0.33
PNKP-204ENST00000594661 UBE2G2P60604 165 aa13□□□□□ -0.33
PNKP-204ENST00000594661 Q6ZT83 130 aa13□□□□□ -0.33
PNKP-204ENST00000594661 MRPL21Q7Z2W9 205 aaKnown RBP13□□□□□ -0.33
PNKP-204ENST00000594661 SPACA3Q8IXA5 215 aa13□□□□□ -0.33
PNKP-204ENST00000594661 C17orf78Q8N4C9 275 aa13□□□□□ -0.33
PNKP-204ENST00000594661 OR5B12Q96R08 314 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms