RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MYL12BO14950 172 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 LDLRAD4O15165 306 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 HSPA12AO43301 675 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 PROP1O75360 226 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 RBBP9O75884 186 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 MAPK3P27361 379 aaPredicted RBP12.53□□□□□ -0.4
LIG1-205ENST00000593425 MC5RP33032 325 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 LINC00205P59089 165 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 PSG5Q15238 335 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 C1orf100Q5SVJ3 147 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 TTC23Q5W5X9 447 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 AHSA2Q719I0 299 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 LRRTM1Q86UE6 522 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 DRAXINQ8NBI3 349 aaPredicted RBP12.53□□□□□ -0.4
LIG1-205ENST00000593425 THRSPQ92748 146 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 HDHD3Q9BSH5 251 aaPredicted RBP12.53□□□□□ -0.4
LIG1-205ENST00000593425 RSRP1Q9BUV0 290 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 SLA2Q9H6Q3 261 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 STUB1Q9UNE7 303 aa12.53□□□□□ -0.4
LIG1-205ENST00000593425 A8MZ25 164 aa12.52□□□□□ -0.41
LIG1-205ENST00000593425 ITGB1BP1O14713 200 aa12.52□□□□□ -0.41
LIG1-205ENST00000593425 ARPC1BO15143 372 aaKnown RBP12.52□□□□□ -0.41
LIG1-205ENST00000593425 TRGV3P03979 118 aa12.52□□□□□ -0.41
LIG1-205ENST00000593425 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
LIG1-205ENST00000593425 RBM48Q5RL73 367 aaKnown RBP12.52□□□□□ -0.41
LIG1-205ENST00000593425 MOB1BQ7L9L4 216 aa12.52□□□□□ -0.41
LIG1-205ENST00000593425 RNF5Q99942 180 aa12.52□□□□□ -0.41
LIG1-205ENST00000593425 ELOVL1Q9BW60 279 aa12.52□□□□□ -0.41
LIG1-205ENST00000593425 C11orf54Q9H0W9 315 aaPredicted RBP12.52□□□□□ -0.41
LIG1-205ENST00000593425 PSORS1C1Q9UIG5 152 aa12.52□□□□□ -0.41
LIG1-205ENST00000593425 CSMD3Q7Z407 3707 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 TMEM14DPA8MWL7 114 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 TFAP2AP05549 437 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 CEACAM6P40199 344 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 HLA-DRB3P79483 266 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 SSBP2P81877 361 aaPredicted RBP12.51□□□□□ -0.41
LIG1-205ENST00000593425 QRFPP83859 136 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 ACSM3Q53FZ2 586 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 GLT8D1Q68CQ7 371 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 ADAMTSL5Q6ZMM2 481 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 ANKRD13BQ86YJ7 626 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 SGPP2Q8IWX5 399 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 DHRSXQ8N5I4 330 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 NANOGP1Q8N7R0 232 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 ZNF383Q8NA42 475 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 GRPEL2Q8TAA5 225 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 KCNG3Q8TAE7 436 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 ISOC1Q96CN7 298 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 AK3Q9UIJ7 227 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 HYDINQ4G0P3 5121 aa12.51□□□□□ -0.41
LIG1-205ENST00000593425 TRBV6-6A0A0A6YYG2 114 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 SLC22A1O15245 554 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 SPDEFO95238 335 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 GNAO1P09471 354 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 CPEP16870 476 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 CD40LGP29965 261 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 POC5Q8NA72 575 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 EDARADDQ8WWZ3 215 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 TSNAXQ99598 290 aaKnown RBP12.5□□□□□ -0.41
LIG1-205ENST00000593425 LPAR5Q9H1C0 372 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 RANGRFQ9HD47 186 aaPredicted RBP12.5□□□□□ -0.41
LIG1-205ENST00000593425 ZNF355PQ9NSJ1 428 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 PLEKHJ1Q9NW61 149 aa12.5□□□□□ -0.41
LIG1-205ENST00000593425 ANKRD34BA5PLL1 514 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 SOCS1O15524 211 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 SLC25A17O43808 307 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 SCTP09683 121 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 ARSBP15848 533 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 ZBTB25P24278 435 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 RPS16P62249 146 aaKnown RBP12.49□□□□□ -0.41
LIG1-205ENST00000593425 DEFA5Q01523 94 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 FXYD3Q14802 87 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 PDPNQ86YL7 162 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 OR5T1Q8NG75 326 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 PHYHIPQ92561 330 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 TMED9Q9BVK6 235 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 PLCXD1Q9NUJ7 323 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 FKBP14Q9NWM8 211 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 ADAM30Q9UKF2 790 aa12.49□□□□□ -0.41
LIG1-205ENST00000593425 IGKV1-6A0A0C4DH72 117 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 C13orf42A0A1B0GVH6 325 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 ZP3P21754 424 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 IL34Q6ZMJ4 242 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 BPIFB6Q8NFQ5 453 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 FBLIM1Q8WUP2 373 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 PTX4Q96A99 478 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 SPATA25Q9BR10 227 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 RIMS4Q9H426 269 aaPredicted RBP12.48□□□□□ -0.41
LIG1-205ENST00000593425 Q9N2K0 584 aa12.48□□□□□ -0.41
LIG1-205ENST00000593425 FOXI3A8MTJ6 420 aaPredicted RBP12.47□□□□□ -0.41
LIG1-205ENST00000593425 H3BUA1 57 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 BPNT1O95861 308 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 IGLV2-23P01705 113 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 CD37P11049 281 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 SRMP19623 302 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 VEGFCP49767 419 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
LIG1-205ENST00000593425 KLF5Q13887 457 aaPredicted RBP12.47□□□□□ -0.41
LIG1-205ENST00000593425 HAGHQ16775 308 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms