RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 P2RX4Q99571 388 aa11.5□□□□□ -0.57
SMARCA4-216ENST00000591545 PCM1Q15154 2024 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 HLA-DQB1P01920 261 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 COL5A1-AS1Q5SY13 56 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 SNRNP40Q96DI7 357 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 ZNF714Q96N38 554 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 ISG15P05161 165 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 GCSHP23434 173 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 MARS2Q96GW9 593 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 CCL13Q99616 98 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 NPVFQ9HCQ7 196 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 GPR132Q9UNW8 380 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 ZFP30Q9Y2G7 519 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 SIRT4Q9Y6E7 314 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 B9A039 149 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 SYNGR3O43761 229 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 MUC1P15941 1255 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 GFRA1P56159 465 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 ZNF273Q14593 569 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 MYOZ3Q8TDC0 251 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 ABHD14AQ9BUJ0 271 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 ASCL3Q9NQ33 180 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 GCGP01275 180 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 CTSBP07858 339 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 CD1BP29016 333 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 TEX30Q5JUR7 227 aa11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 COL25A1Q9BXS0 654 aaPredicted RBP11.49□□□□□ -0.57
SMARCA4-216ENST00000591545 RIF1Q5UIP0 2472 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 IFITM10A6NMD0 228 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 MGAT2Q10469 447 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 AP5S1Q9NUS5 200 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 DIRC3C9JPN6 131 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 HIST1H1BP16401 226 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 ZNF25P17030 456 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 SMAGPQ0VAQ4 97 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 MUC15Q8N387 334 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 FAM57AQ8TBR7 257 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 FAM90A26D6RGX4 464 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 J3QR06 171 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 K7ERU9 68 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 SUCLG1P53597 346 aaKnown RBP11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 FGF12P61328 243 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 COL10A1Q03692 680 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 ZNF660Q6AZW8 331 aaPredicted RBP11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 ABCA7Q8IZY2 2146 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 OR8I2Q8N0Y5 310 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 TMEM252Q8N6L7 170 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 WDR31Q8NA23 367 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 LINC01560Q8TB33 94 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 AQP10Q96PS8 301 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 KLHDC2Q9Y2U9 406 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 A8MWL6 223 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 TNFSF10P50591 281 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 SELENOTP62341 195 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 CEACAM21Q3KPI0 293 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 TMEM222Q9H0R3 208 aa11.48□□□□□ -0.57
SMARCA4-216ENST00000591545 CXorf65A6NEN9 183 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 KLF7O75840 302 aaPredicted RBP11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 IL11P20809 199 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 GCSAMQ8N6F7 178 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 KCNK7Q9Y2U2 307 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 DLX1P56177 255 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 CLDN18P56856 261 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 RBPMS2Q6ZRY4 209 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 SPACA3Q8IXA5 215 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 CTHRC1Q96CG8 243 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 MS4A3Q96HJ5 214 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 MRPL37Q9BZE1 423 aaKnown RBP11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 OR51B2Q9Y5P1 312 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 TRBV5-7A0A0A0MS05 114 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 RAB29O14966 203 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 FAM106CPP0CH98 169 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 CD59P13987 128 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 DCAF12L2Q5VW00 463 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 SLC25A47Q6Q0C1 308 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 CYB561D1Q8N8Q1 229 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 OR8G5Q8NG78 346 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 SGMS2Q8NHU3 365 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 CLEC5AQ9NY25 188 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 HIGD1AQ9Y241 93 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 FOXH1O75593 365 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 IGKV3-11P04433 115 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 COX5BP10606 129 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 AESQ08117 197 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 ECSCRQ19T08 205 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 OR2D3Q8NGH3 330 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 TBX15Q96SF7 602 aa11.47□□□□□ -0.57
SMARCA4-216ENST00000591545 RCC1P18754 421 aaPredicted RBP11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 IFITM2Q01629 132 aa11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 LRRC75AQ8NAA5 344 aa11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 OR4B1Q8NGF8 309 aa11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 SIGLEC12Q96PQ1 595 aa11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 ZNF703Q9H7S9 590 aaPredicted RBP11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 DHRS7CA6NNS2 312 aa11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 K7N7A8 449 aa11.46□□□□□ -0.57
SMARCA4-216ENST00000591545 SRSF9Q13242 221 aaKnown RBP eCLIP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms