RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CLEC18CQ8NCF0 446 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 ABHD3Q8WU67 409 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 MDFIC2A0A1B0GVS7 189 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 GPX1P07203 203 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 MYF5P13349 255 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 EFNA3P52797 238 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 TAF15Q92804 592 aaKnown RBP eCLIP12.91□□□□□ -0.34
CIRBP-228ENST00000590347 WASHC3Q9Y3C0 194 aa12.91□□□□□ -0.34
CIRBP-228ENST00000590347 LOC102725191A0A1B0GVB3 256 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 CLDN1O95832 211 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 PPBPP02775 128 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 SERPINE2P07093 398 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 FUT6P51993 359 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 SRPXP78539 464 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 PRR27Q6MZM9 219 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 CENPVQ7Z7K6 275 aaPredicted RBP12.9□□□□□ -0.34
CIRBP-228ENST00000590347 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
CIRBP-228ENST00000590347 WDR61Q9GZS3 305 aaKnown RBP12.9□□□□□ -0.34
CIRBP-228ENST00000590347 SEPSECSQ9HD40 501 aaKnown RBP12.9□□□□□ -0.34
CIRBP-228ENST00000590347 IGHV3-15A0A0B4J1V0 119 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 DPRXA6NFQ7 191 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 TMEM150CB9EJG8 249 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 MRPL49Q13405 166 aaKnown RBP12.9□□□□□ -0.34
CIRBP-228ENST00000590347 TMEM144Q7Z5S9 345 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 MRPL52Q86TS9 123 aaKnown RBP12.9□□□□□ -0.34
CIRBP-228ENST00000590347 TDHQ8IZJ6 230 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 NEUROG1Q92886 237 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 KLHDC7BQ96G42 594 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 SFRP2Q96HF1 295 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 SLC35D1Q9NTN3 355 aa12.9□□□□□ -0.34
CIRBP-228ENST00000590347 SLC22A20A6NK97 555 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 HS3ST1O14792 307 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 HHEXQ03014 270 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 SLC38A11Q08AI6 406 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 ZNF841Q6ZN19 808 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 SOHLH2Q9NX45 425 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 CRIM1Q9NZV1 1036 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 MMP17Q9ULZ9 603 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 PPP1R3CQ9UQK1 317 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 A0A1W2PN81 502 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 SYNGR2O43760 224 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 CIDEAO60543 219 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 DHRS3O75911 302 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 CLDN14O95500 239 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 LRRC75BQ2VPJ9 315 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 PLCXD3Q63HM9 321 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 TMEM56Q96MV1 263 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 PLEK2Q9NYT0 353 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 NAT8BQ9UHF3 227 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 ATP23Q9Y6H3 246 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 TMEM56-RWDD3S4R434 201 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
CIRBP-228ENST00000590347 TNFP01375 233 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 SELENOVP59797 346 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 LCN2P80188 198 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 TSTD1Q8NFU3 115 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 ZNF721Q8TF20 911 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 DDIT4LQ96D03 193 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 GP6Q9HCN6 339 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 DOCK7Q96N67 2140 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 CD300LBA8K4G0 201 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 EFNA2O43921 213 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 ZNF253O75346 499 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 PPOXP50336 477 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 ZNF83P51522 516 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 MRPS21P82921 87 aaKnown RBP12.88□□□□□ -0.35
CIRBP-228ENST00000590347 OR8I2Q8N0Y5 310 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 BORCS8Q96FH0 119 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 TIMM8BQ9Y5J9 83 aaPredicted RBP12.88□□□□□ -0.35
CIRBP-228ENST00000590347 PCDH15Q96QU1 1955 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 A6NCN8 305 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 TMEM250H0YL14 139 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 SNAI2O43623 268 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 MALLQ13021 153 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 FXYD3Q14802 87 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 MRPL54Q6P161 138 aaKnown RBP12.88□□□□□ -0.35
CIRBP-228ENST00000590347 ADIPOR1Q96A54 375 aa12.88□□□□□ -0.35
CIRBP-228ENST00000590347 ZNF837Q96EG3 531 aaPredicted RBP12.88□□□□□ -0.35
CIRBP-228ENST00000590347 ZNF318Q5VUA4 2279 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 G3V3Y1 287 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 H0Y8G0 127 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 IGHG1P01857 330 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 LHFPL4Q7Z7J7 247 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 FAM58AQ8N1B3 248 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 OCC1Q8TAD7 63 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 HSPB7Q9UBY9 170 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 SCO2A0A1W2PP80 73 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 ALG1L2C9J202 215 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 GNG7O60262 68 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 IGHMP01871 453 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 OSR2Q8N2R0 312 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 OR1L1Q8NH94 360 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 IFI44Q8TCB0 444 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 CLEC7AQ9BXN2 247 aa12.87□□□□□ -0.35
CIRBP-228ENST00000590347 A0A1W2PS18 150 aa12.86□□□□□ -0.35
CIRBP-228ENST00000590347 TCTAP57738 103 aa12.86□□□□□ -0.35
CIRBP-228ENST00000590347 DEFB133Q30KQ1 61 aa12.86□□□□□ -0.35
CIRBP-228ENST00000590347 PIGCQ92535 297 aa12.86□□□□□ -0.35
CIRBP-228ENST00000590347 GMPPAQ96IJ6 420 aaPredicted RBP12.86□□□□□ -0.35
CIRBP-228ENST00000590347 MUC21A0A0G2JKD1 596 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms