RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 RBM7Q9Y580 266 aaKnown RBP9.72□□□□□ -0.85
APOC1-206ENST00000590334 IGHV1-3A0A0C4DH29 117 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 OR5H14A6NHG9 310 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 FAM90A9PA6NNJ1 464 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 J3QRK9 145 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 PAX6P26367 422 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 IER3P46695 156 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 ARHGDIBP52566 201 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 EIF4EBP1Q13541 118 aaPredicted RBP9.71□□□□□ -0.86
APOC1-206ENST00000590334 LRRC75BQ2VPJ9 315 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 PLA1AQ53H76 456 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 RPL39P5Q59GN2 51 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 ZNF57Q68EA5 555 aaPredicted RBP9.71□□□□□ -0.86
APOC1-206ENST00000590334 FAAP20Q6NZ36 180 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 LPCAT3Q6P1A2 487 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 DRAM1Q8N682 238 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 SIGLECL1Q8N7X8 197 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 ZBTB34Q8NCN2 500 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 PIFOQ8TCI5 191 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 SECTM1Q8WVN6 248 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 BORCS5Q969J3 196 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 MRGPRFQ96AM1 343 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 C5orf30Q96GV9 206 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 PRRT1Q99946 306 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 C7orf50Q9BRJ6 194 aaKnown RBP9.71□□□□□ -0.86
APOC1-206ENST00000590334 SLC5A7Q9GZV3 580 aa9.71□□□□□ -0.86
APOC1-206ENST00000590334 A0A0A6YYJ9 748 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 NAP1L6A6NFF2 107 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 TIMM23O14925 209 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 UPK1BO75841 260 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 CT45A6P0DMU7 189 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 CT45A5P0DMU8 189 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 CT45A7P0DMV0 189 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 GNRHRP30968 328 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 BRS3P32247 399 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 ECI1P42126 302 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 REG1BP48304 166 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 INPP1P49441 399 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 FXYD4P59646 89 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 THNSL2Q86YJ6 484 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 LURAP1LQ8IV03 231 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 TMEM86BQ8N661 226 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 BVESQ8NE79 360 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 OR51S1Q8NGJ8 323 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 ZNF418Q8TF45 676 aaPredicted RBP9.7□□□□□ -0.86
APOC1-206ENST00000590334 SSMEM1Q8WWF3 244 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 AKR1E2Q96JD6 320 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 TSC22D3Q99576 134 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 SSX3Q99909 188 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 NABP2Q9BQ15 211 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 RSRP1Q9BUV0 290 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 MRPL20Q9BYC9 149 aaKnown RBP9.7□□□□□ -0.86
APOC1-206ENST00000590334 CCL28Q9NRJ3 127 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 SCP2D1Q9UJQ7 156 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 POMT1Q9Y6A1 747 aa9.7□□□□□ -0.86
APOC1-206ENST00000590334 PLA2G10O15496 165 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 CD1BP29016 333 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 MTORP42345 2549 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 HILS1P60008 231 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 EBI3Q14213 229 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 SURF2Q15527 256 aaPredicted RBP9.69□□□□□ -0.86
APOC1-206ENST00000590334 SCGB2B2Q4G0G5 96 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 RBMS3Q6XE24 437 aaKnown RBP9.69□□□□□ -0.86
APOC1-206ENST00000590334 ZNF818PQ6ZRF7 136 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 SLC38A6Q8IZM9 456 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 OR5AN1Q8NGI8 311 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 OR13C8Q8NGS7 320 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 OR5R1Q8NH85 324 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 ZNF486Q96H40 463 aaPredicted RBP9.69□□□□□ -0.86
APOC1-206ENST00000590334 ADTRPQ96IZ2 230 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 DPAGT1Q9H3H5 408 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 OCEL1Q9H607 264 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 MCUBQ9NWR8 336 aa9.69□□□□□ -0.86
APOC1-206ENST00000590334 CENPXA8MT69 81 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 H3BUX3 64 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 CLDN34H7C241 214 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 M0R1X1 148 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 HOXA3O43365 443 aaPredicted RBP9.68□□□□□ -0.86
APOC1-206ENST00000590334 IGHV4-59P01825 116 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 MC5RP33032 325 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 DUTP33316 252 aaKnown RBP9.68□□□□□ -0.86
APOC1-206ENST00000590334 THBS3P49746 956 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 RAB13P51153 203 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 IFITM3Q01628 133 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 TAGLNQ01995 201 aaKnown RBP9.68□□□□□ -0.86
APOC1-206ENST00000590334 ZNF66Q6ZN08 573 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 IDO2Q6ZQW0 420 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 MOB3BQ86TA1 216 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 ZNF383Q8NA42 475 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 DDB2Q92466 427 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 JMJD8Q96S16 334 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 HSD17B10Q99714 261 aaKnown RBP9.68□□□□□ -0.86
APOC1-206ENST00000590334 ESM1Q9NQ30 184 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 ABCB10Q9NRK6 738 aa9.68□□□□□ -0.86
APOC1-206ENST00000590334 DNAJC9-AS1A6NH13 148 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 LINC00473A8K010 186 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 H0YJW9 148 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 GPR31O00270 319 aa9.67□□□□□ -0.86
APOC1-206ENST00000590334 LYRM1O43325 122 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms