RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 TPPP3Q9BW30 176 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 CEACAM1P13688 526 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 OR13A1Q8NGR1 328 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 ATP5SQ99766 215 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 NRIP2Q9BQI9 281 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 ABHD14AQ9BUJ0 271 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 ZNF665Q9H7R5 613 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 GFRA3O60609 400 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 ZG16O60844 167 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 ZNF737O75373 536 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 WISP2O76076 250 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 CHRNA7P36544 502 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 SNRPEP62304 92 aaKnown RBP12.35□□□□□ -0.43
RETREG3-208ENST00000589797 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-208ENST00000589797 PRR27Q6MZM9 219 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 SLC35E1Q96K37 410 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 AQP10Q96PS8 301 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 PKIBQ9C010 78 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 OR51I2Q9H344 312 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 IGHV2OR16-5A0A0B4J2B6 119 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 SRSF3P84103 164 aaKnown RBP12.35□□□□□ -0.43
RETREG3-208ENST00000589797 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 OR5D13Q8NGL4 314 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 UHRF2Q96PU4 802 aa12.35□□□□□ -0.43
RETREG3-208ENST00000589797 TMEM210A6NLX4 147 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 OTX1P32242 354 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-208ENST00000589797 KIR2DL2P43627 348 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-208ENST00000589797 FAM216BQ8N7L0 139 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 OR4C12Q96R67 309 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 TRAV38-1A0A0B4J264 116 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
RETREG3-208ENST00000589797 OPRK1P41145 380 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 ABHD12Q8N2K0 398 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 MISP3Q96FF7 219 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 MYO9AB2RTY4 2548 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 A0A1B0GU03 582 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 IGSF23A1L1A6 192 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 A8MXE2 369 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 MGST3O14880 152 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 ATXN7O15265 892 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-208ENST00000589797 CA11O75493 328 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 HRASP01112 189 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 NCR3LG1Q68D85 454 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 FAM53AQ6NSI3 398 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-208ENST00000589797 ZDHHC16Q969W1 377 aa12.34□□□□□ -0.43
RETREG3-208ENST00000589797 C1orf147Q96MC9 270 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-208ENST00000589797 IGKV3D-15A0A087WSY6 115 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 MDFIC2A0A1B0GVS7 189 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 A0A1W2PNU3 283 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 H0Y980 276 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 PTBP3O95758 552 aaKnown RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 NUDT16L1Q9BRJ7 211 aaKnown RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 NIT2Q9NQR4 276 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 SLC25A10Q9UBX3 287 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 FBLN5Q9UBX5 448 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 MRPS18CQ9Y3D5 142 aaKnown RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 NUDT19A8MXV4 375 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 PSPNO60542 156 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 RPS2P15880 293 aaKnown RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 WT1P19544 449 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 SULT1A2P50226 295 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 SMUG1Q53HV7 270 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF880Q6PDB4 577 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 MRPL30Q8TCC3 161 aaKnown RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 HSD17B10Q99714 261 aaKnown RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 MYOZ1Q9NP98 299 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 CYB561D1Q8N8Q1 229 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 MDS2Q8NDY4 140 aa12.33□□□□□ -0.44
RETREG3-208ENST00000589797 GTF3AQ92664 365 aaKnown RBP12.33□□□□□ -0.44
RETREG3-208ENST00000589797 C17orf98A8MV24 154 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 SEC11BP0C7V7 166 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 IL3RAP26951 378 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 CD200P41217 278 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 GNB2P62879 340 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 SSX2Q16385 188 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 EIF2S3LQ2VIR3 472 aaKnown RBP12.32□□□□□ -0.44
RETREG3-208ENST00000589797 DHRS11Q6UWP2 260 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 LHFPL5Q8TAF8 219 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 TMEM37Q8WXS4 190 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 MMP9P14780 707 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 C20orf204Q6ZNR8 217 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 HARBI1Q96MB7 349 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 PPP5D1E7EU14 171 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 DTX1Q86Y01 620 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 OR4S2Q8NH73 311 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 RPEQ96AT9 228 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 METRNQ9UJH8 293 aa12.32□□□□□ -0.44
RETREG3-208ENST00000589797 PPIAL4EA0A075B759 164 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 PPIAL4DF5H284 164 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 LYNX1G3V0Z9 82 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 PPIAL4FP0DN26 164 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 LYNX1P0DP58 116 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 NANPQ8TBE9 248 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
RETREG3-208ENST00000589797 PPIAL4AQ9Y536 164 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-208ENST00000589797 ETV2O00321 342 aaPredicted RBP12.31□□□□□ -0.44
RETREG3-208ENST00000589797 PAGE4O60829 102 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 CRYBA1P05813 215 aa12.31□□□□□ -0.44
RETREG3-208ENST00000589797 ZNF705DP0CH99 300 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms