RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ZNF672Q499Z4 452 aaPredicted RBP7.27□□□□□ -1.25
SMAD4-206ENST00000588860 NMSQ5H8A3 153 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 BTNL3Q6UXE8 466 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 COMMD7Q86VX2 200 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 GPR146Q96CH1 333 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 C5orf30Q96GV9 206 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 GSX2Q9BZM3 304 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 PLEKHA2Q9HB19 425 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 RAB9BQ9NP90 201 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 TMEM106BQ9NUM4 274 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 JPT1Q9UK76 154 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 ZFHX3Q15911 3703 aa7.27□□□□□ -1.25
SMAD4-206ENST00000588860 ANKHD1Q8IWZ3 2542 aaKnown RBP7.26□□□□□ -1.25
SMAD4-206ENST00000588860 PPIAL4EA0A075B759 164 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 PPIAL4DF5H284 164 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 F2RL2O00254 374 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 TMPRSS2O15393 492 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 SSSCA1O60232 199 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 GPR137BO60478 399 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 NXPH3O95157 252 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 IGKV1-39P01597 117 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 IGKV1D-39P04432 117 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 PPIAL4FP0DN26 164 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 TPT1P13693 172 aaKnown RBP7.26□□□□□ -1.25
SMAD4-206ENST00000588860 NDUFB7P17568 137 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 GNLYP22749 145 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 LOXP28300 417 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-206ENST00000588860 LPAR6P43657 344 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 NKX2-1P43699 371 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-206ENST00000588860 P2RY1P47900 373 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 VAMP2P63027 116 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 TFF3Q07654 80 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 EIF4EBP1Q13541 118 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-206ENST00000588860 OR2B11Q5JQS5 317 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 MUC15Q8N387 334 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 FGFRL1Q8N441 504 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 STOML3Q8TAV4 291 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 TCTEX1D2Q8WW35 142 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 EDARADDQ8WWZ3 215 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 CCL17Q92583 94 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 ABHD14BQ96IU4 210 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 CITED4Q96RK1 184 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 MAGT1Q9H0U3 335 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 MS4A5Q9H3V2 200 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 CYTL1Q9NRR1 136 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 SDHAF2Q9NX18 166 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 PPIAL4AQ9Y536 164 aa7.26□□□□□ -1.25
SMAD4-206ENST00000588860 TET2Q6N021 2002 aaPredicted RBP7.26□□□□□ -1.25
SMAD4-206ENST00000588860 IGHV1-69-2A0A0G2JMI3 117 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 A0A0G2JRQ6 117 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 KBTBD11-OT1A0A1B0GTJ5 212 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 A0A1B0GU03 582 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 ANKRD34BA5PLL1 514 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 ZNF729A6NN14 1252 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-206ENST00000588860 LEUTXA8MZ59 168 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 WRBO00258 174 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 TAAR5O14804 337 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 YPEL1O60688 119 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 CLDN14O95500 239 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 IGKV1-5P01602 117 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 CGB3P0DN86 165 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 CGB7P0DN87 165 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 SLC25A6P12236 298 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 PVALBP20472 110 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-206ENST00000588860 OMGP23515 440 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 NFYBP25208 207 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 UQCRFS1P47985 274 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 AKR1C2P52895 323 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 LOXL3P58215 753 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 POLR2GP62487 172 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMAD4-206ENST00000588860 RPL30P62888 115 aaKnown RBP7.25□□□□□ -1.25
SMAD4-206ENST00000588860 SWI5Q1ZZU3 235 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 C17orf58Q2M2W7 97 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 MORN2Q502X0 79 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 ZNF585BQ52M93 769 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 CXorf66Q5JRM2 361 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-206ENST00000588860 FAM74A1Q5RGS3 127 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 ZNF66Q6ZN08 573 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 TCF23Q7RTU1 214 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 DMBX1Q8NFW5 382 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 LEAP2Q969E1 77 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 LSM10Q969L4 123 aaKnown RBP7.25□□□□□ -1.25
SMAD4-206ENST00000588860 PHYHIPLQ96FC7 376 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 CXorf58Q96LI9 332 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 YPEL2Q96QA6 119 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 TMEM204Q9BSN7 226 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 SMIM3Q9BZL3 60 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 GFOD1Q9NXC2 390 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 IDI2-AS1Q9NZ38 188 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 SLC25A10Q9UBX3 287 aaPredicted RBP7.25□□□□□ -1.25
SMAD4-206ENST00000588860 CLN8Q9UBY8 286 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 FBXL17Q9UF56 701 aa7.25□□□□□ -1.25
SMAD4-206ENST00000588860 hADV38S2A0JD32 116 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 C17orf98A8MV24 154 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 M0R1X1 148 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 SLC31A2O15432 143 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 NDUFB3O43676 98 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 CLDN1O95832 211 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 IGHV3-7P01780 117 aa7.24□□□□□ -1.25
SMAD4-206ENST00000588860 NMBP08949 121 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms