RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 OR52B4Q8NGK2 314 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 ZDHHC16Q969W1 377 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 RTBDNQ9BSG5 229 aaPredicted RBP16.36■□□□□ 0.21
ATG4D-208ENST00000588667 CLEC7AQ9BXN2 247 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 FXYD6Q9H0Q3 95 aa16.36■□□□□ 0.21
ATG4D-208ENST00000588667 A0A087X0M5 115 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 A0A1B0GX30 115 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 SPINT2O43291 252 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 HSPA12AO43301 675 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 HLA-AP01891 365 aaKnown RBP16.35■□□□□ 0.21
ATG4D-208ENST00000588667 ARG1P05089 322 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 HNRNPCP07910 306 aaKnown RBP eCLIP16.35■□□□□ 0.21
ATG4D-208ENST00000588667 ZBTB25P24278 435 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 CD34P28906 385 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 LGALS4P56470 323 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 DHRS2Q13268 280 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 H1FOOQ8IZA3 346 aaPredicted RBP16.35■□□□□ 0.21
ATG4D-208ENST00000588667 RAB9BQ9NP90 201 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 ESM1Q9NQ30 184 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 IDI2-AS1Q9NZ38 188 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 SLC23A1Q9UHI7 598 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 COL6A5A8TX70 2615 aa16.35■□□□□ 0.21
ATG4D-208ENST00000588667 C15orf65H3BRN8 121 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 HBZP02008 142 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 PI3P19957 117 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 PPP1R1AQ13522 171 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 FCN2Q15485 313 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 ABCA11PQ4W5N1 156 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 Q6YL49 198 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 LYG2Q86SG7 212 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 LDLRAD3Q86YD5 345 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 RFESDQ8TAC1 157 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 ARL11Q969Q4 196 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 OR2W1Q9Y3N9 320 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 TBL2Q9Y4P3 447 aaKnown RBP16.34■□□□□ 0.21
ATG4D-208ENST00000588667 DNAJC9-AS1A6NH13 148 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 SULT1A3P0DMM9 295 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 SULT1A4P0DMN0 295 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 VAMP1P23763 118 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 DHODHQ02127 395 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 C11orf88Q6PI97 169 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 ABHD12Q8N2K0 398 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 OR1L1Q8NH94 360 aa16.34■□□□□ 0.21
ATG4D-208ENST00000588667 ZNF486Q96H40 463 aaPredicted RBP16.34■□□□□ 0.21
ATG4D-208ENST00000588667 C9orf170A2RU37 121 aa16.33■□□□□ 0.2
ATG4D-208ENST00000588667 NFYBP25208 207 aa16.33■□□□□ 0.2
ATG4D-208ENST00000588667 SRSF2Q01130 221 aaKnown RBP16.33■□□□□ 0.2
ATG4D-208ENST00000588667 TMEM230Q96A57 120 aa16.33■□□□□ 0.2
ATG4D-208ENST00000588667 AJUBAQ96IF1 538 aa16.33■□□□□ 0.2
ATG4D-208ENST00000588667 RSRP1Q9BUV0 290 aa16.33■□□□□ 0.2
ATG4D-208ENST00000588667 OR1A1Q9P1Q5 309 aa16.33■□□□□ 0.2
ATG4D-208ENST00000588667 ZNRD1Q9P1U0 126 aa16.33■□□□□ 0.2
ATG4D-208ENST00000588667 CLDN34H7C241 214 aa16.32■□□□□ 0.2
ATG4D-208ENST00000588667 CD83Q01151 205 aa16.32■□□□□ 0.2
ATG4D-208ENST00000588667 TMEM30BQ3MIR4 351 aa16.32■□□□□ 0.2
ATG4D-208ENST00000588667 C12orf45Q8N5I9 185 aaPredicted RBP16.32■□□□□ 0.2
ATG4D-208ENST00000588667 UBALD1Q8TB05 177 aa16.32■□□□□ 0.2
ATG4D-208ENST00000588667 ZNF596Q8TC21 504 aa16.32■□□□□ 0.2
ATG4D-208ENST00000588667 C17orf50Q8WW18 174 aa16.32■□□□□ 0.2
ATG4D-208ENST00000588667 SSMEM1Q8WWF3 244 aa16.32■□□□□ 0.2
ATG4D-208ENST00000588667 FBN1P35555 2871 aaKnown RBP16.32■□□□□ 0.2
ATG4D-208ENST00000588667 TRIM77I1YAP6 450 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 F2RL2O00254 374 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 HOXA3O43365 443 aaPredicted RBP16.31■□□□□ 0.2
ATG4D-208ENST00000588667 DUS4LO95620 317 aaKnown RBP16.31■□□□□ 0.2
ATG4D-208ENST00000588667 CEACAM6P40199 344 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 PIGPP57054 158 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 UBA52P62987 128 aaKnown RBP16.31■□□□□ 0.2
ATG4D-208ENST00000588667 HTD2P86397 168 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 CD300CQ08708 224 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 LTC4SQ16873 150 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 MINOS1Q5TGZ0 78 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 LHFPL4Q7Z7J7 247 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 SGPP2Q8IWX5 399 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 TMEM86BQ8N661 226 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 CCDC71LQ8N9Z2 235 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 BEND2Q8NDZ0 799 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 OR11H7Q8NGC8 314 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 OR52M1Q8NGK5 317 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 SECTM1Q8WVN6 248 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 ST6GAL2Q96JF0 529 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 PHB2Q99623 299 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 SLC5A7Q9GZV3 580 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 RDH8Q9NYR8 311 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 MINOS1-NBL1R4GNA1 71 aa16.31■□□□□ 0.2
ATG4D-208ENST00000588667 IGLV1-47P01700 117 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 LUMP51884 338 aaPredicted RBP16.3■□□□□ 0.2
ATG4D-208ENST00000588667 SLC9A3R2Q15599 337 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 UXS1Q8NBZ7 420 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 OR4P4Q8NGL7 312 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 OR9G1Q8NH87 305 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 MITD1Q8WV92 249 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 TOLLIPQ9H0E2 274 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 OR2S2Q9NQN1 319 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 SLC2A9Q9NRM0 540 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 POMT1Q9Y6A1 747 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 TEX13DA0A0J9YY54 714 aaPredicted RBP16.3■□□□□ 0.2
ATG4D-208ENST00000588667 TOR1AO14656 332 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 SFT2D2O95562 160 aa16.3■□□□□ 0.2
ATG4D-208ENST00000588667 UTF1Q5T230 341 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms