RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 CD1AP06126 327 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 CEACAM6P40199 344 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 RPS16P62249 146 aaKnown RBP12.92□□□□□ -0.34
LINC01842-201ENST00000588275 UNC119Q13432 240 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 PSG5Q15238 335 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 AKIRIN2Q53H80 203 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 ANKRD13BQ86YJ7 626 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 C8orf59Q8N0T1 100 aaPredicted RBP12.92□□□□□ -0.34
LINC01842-201ENST00000588275 KCNG3Q8TAE7 436 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 HDHD3Q9BSH5 251 aaPredicted RBP12.92□□□□□ -0.34
LINC01842-201ENST00000588275 SLA2Q9H6Q3 261 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 PSORS1C1Q9UIG5 152 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 STUB1Q9UNE7 303 aa12.92□□□□□ -0.34
LINC01842-201ENST00000588275 SLC22A1O15245 554 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 TFAP2AP05549 437 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 GNAO1P09471 354 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 IGHV4-30-4P0DP06 118 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 HLA-DRB3P79483 266 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 ZNF880Q6PDB4 577 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 LRRTM1Q86UE6 522 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 SGPP2Q8IWX5 399 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 NANOGP1Q8N7R0 232 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 OR5AN1Q8NGI8 311 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 EDARADDQ8WWZ3 215 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 RHOVQ96L33 236 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 TSNAXQ99598 290 aaKnown RBP12.91□□□□□ -0.34
LINC01842-201ENST00000588275 LYSTQ99698 3801 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 TM2D1Q9BX74 207 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 C11orf54Q9H0W9 315 aaPredicted RBP12.91□□□□□ -0.34
LINC01842-201ENST00000588275 AK3Q9UIJ7 227 aa12.91□□□□□ -0.34
LINC01842-201ENST00000588275 A0A0A6YYD4 124 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 C13orf42A0A1B0GVH6 325 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 ANKRD34BA5PLL1 514 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 LDLRAD4O15165 306 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 ZBTB25P24278 435 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 LINC00205P59089 165 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 HSD17B12Q53GQ0 312 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 C1orf100Q5SVJ3 147 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 LAIR2Q6ISS4 152 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 ZNF562Q6V9R5 426 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 ISOC1Q96CN7 298 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 AGMATQ9BSE5 352 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 ZNF221Q9UK13 617 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 STARD9Q9P2P6 4700 aa12.9□□□□□ -0.34
LINC01842-201ENST00000588275 SOCS1O15524 211 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 SLC25A17O43808 307 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 APOA2P02652 100 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 IGKV1-16P04430 117 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 ARSBP15848 533 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 DEFA5Q01523 94 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 FXYD3Q14802 87 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 P2RY14Q15391 338 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 CEACAM19Q7Z692 300 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 MS4A15Q8N5U1 240 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 PACRGLQ8N7B6 248 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 POC5Q8NA72 575 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 OR5T1Q8NG75 326 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 PHYHIPQ92561 330 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 RNF5Q99942 180 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 TM2D3Q9BRN9 247 aa12.89□□□□□ -0.35
LINC01842-201ENST00000588275 RIMS4Q9H426 269 aaPredicted RBP12.89□□□□□ -0.35
LINC01842-201ENST00000588275 RANGRFQ9HD47 186 aaPredicted RBP12.89□□□□□ -0.35
LINC01842-201ENST00000588275 DNAH1Q9P2D7 4330 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 LCE6AA0A183 80 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 TMEM14DPA8MWL7 114 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 ITGB1BP1O14713 200 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 ARPC1BO15143 372 aaKnown RBP12.88□□□□□ -0.35
LINC01842-201ENST00000588275 SPDEFO95238 335 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 CNIH1O95406 144 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 BPNT1O95861 308 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 IGLV1-51P01701 117 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 SCTP09683 121 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 SRMP19623 302 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 ZP3P21754 424 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 Q8N1Y9 231 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 ZNF383Q8NA42 475 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 OR6M1Q8NGM8 313 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
LINC01842-201ENST00000588275 MND1Q9BWT6 205 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 LPAR5Q9H1C0 372 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 PLGRKTQ9HBL7 147 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 C8orf4Q9NR00 106 aa12.88□□□□□ -0.35
LINC01842-201ENST00000588275 M0R1X1 148 aa12.87□□□□□ -0.35
LINC01842-201ENST00000588275 QRFPP83859 136 aa12.87□□□□□ -0.35
LINC01842-201ENST00000588275 PDPNQ86YL7 162 aa12.87□□□□□ -0.35
LINC01842-201ENST00000588275 C12orf4Q9NQ89 552 aa12.87□□□□□ -0.35
LINC01842-201ENST00000588275 SLC35D1Q9NTN3 355 aa12.87□□□□□ -0.35
LINC01842-201ENST00000588275 PLCXD1Q9NUJ7 323 aa12.87□□□□□ -0.35
LINC01842-201ENST00000588275 MGAT4AQ9UM21 535 aa12.87□□□□□ -0.35
LINC01842-201ENST00000588275 CSMD3Q7Z407 3707 aa12.87□□□□□ -0.35
LINC01842-201ENST00000588275 EPPK1P58107 5090 aaKnown RBP12.86□□□□□ -0.35
LINC01842-201ENST00000588275 TRBV6-6A0A0A6YYG2 114 aa12.86□□□□□ -0.35
LINC01842-201ENST00000588275 EBAG9O00559 213 aa12.86□□□□□ -0.35
LINC01842-201ENST00000588275 PROP1O75360 226 aa12.86□□□□□ -0.35
LINC01842-201ENST00000588275 VEGFCP49767 419 aa12.86□□□□□ -0.35
LINC01842-201ENST00000588275 MED22Q15528 200 aa12.86□□□□□ -0.35
LINC01842-201ENST00000588275 CMSS1Q9BQ75 279 aaKnown RBP12.86□□□□□ -0.35
LINC01842-201ENST00000588275 Q9N2K0 584 aa12.86□□□□□ -0.35
LINC01842-201ENST00000588275 C19orf73Q9NVV2 129 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms