RNA–Protein interactions for RNA: ENST00000586569.2

TNFRSF11A-202, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 8,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-202ENST00000586569 PSG9Q00887 426 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 ZBTB34Q8NCN2 500 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 RNASEH2CQ8TDP1 164 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TM4SF4P48230 202 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 RAE1P78406 368 aaKnown RBP12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 DCTN5Q9BTE1 182 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CTDSPLO15194 276 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CDK2AP2O75956 126 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 THY1P04216 161 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 RUNX1Q01196 453 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 C9orf62Q8N4C0 152 aa12.77□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SCN11AQ9UI33 1791 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CTAG1AP78358 180 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 LINC00596Q86U02 117 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TRA2AQ13595 282 aaKnown RBP eCLIP12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 MRM2Q9UI43 246 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CCL21O00585 134 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 ARL14EPLP0DKL9 152 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 MUC1P15941 1255 aaPredicted RBP12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SIGLEC5O15389 551 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CTSVO60911 334 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 NKX2-2O95096 273 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 KLK2P20151 261 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 HBBP68871 147 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 REG1AP05451 166 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 ADRA2AP08913 450 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SNRPD3P62318 126 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 PAPPA-AS1Q5QFB9 102 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 KCNK7Q9Y2U2 307 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SNAI2O43623 268 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 GAPDHP04406 335 aaKnown RBP12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 PCMT1P22061 227 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TSPOP30536 169 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TMEM45BQ96B21 275 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 ZNF414Q96IQ9 312 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 MCM3APO60318 1980 aa12.76□□□□□ -0.37
TNFRSF11A-202ENST00000586569 PRR32B1ATL7 298 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 FAM106AQ4KMX7 169 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 MESTQ5EB52 335 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 XAF1Q6GPH4 301 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 C10orf35Q96D05 121 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CD300CQ08708 224 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 DERL1Q9BUN8 251 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SLC6A13Q9NSD5 602 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 OR11H12B2RN74 326 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 KLK8O60259 260 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 UNQ5815/PRO19632Q6UWF5 114 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SPNS2Q8IVW8 549 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SPEM1Q8N4L4 309 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 OR11H1Q8NG94 326 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 OR11H2Q8NH07 326 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 NDUFA3O95167 84 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SERF2P84101 59 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 NXT2Q9NPJ8 142 aaKnown RBP12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SF3B6Q9Y3B4 125 aaKnown RBP12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 ZNF646O15015 1829 aaPredicted RBP12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 RPL36A-HNRNPH2H7BZ11 118 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SEC11BP0C7V7 166 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 LY6EQ16553 131 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 PPIAL4EA0A075B759 164 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 GRIFINA4D1Z8 144 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 PPIAL4DF5H284 164 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 HPRT1P00492 218 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 PPIAL4FP0DN26 164 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 PPIAL4AQ9Y536 164 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TMEM250H0YL14 139 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 EFNB2P52799 333 aa12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TRIP6Q15654 476 aaKnown RBP12.75□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CHD3Q12873 2000 aaKnown RBP12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TDRD15B5MCY1 1934 aaKnown RBP12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CT55Q8WUE5 264 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CEACAM4O75871 244 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CENPVQ7Z7K6 275 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 OR2K2Q8NGT1 345 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 APOBEC4Q8WW27 367 aaKnown RBP12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 LINC01565O15544 149 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 HTN3P15516 51 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SPTY2D1-AS1A0A0U1RR47 76 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 KIR3DL3Q8N743 410 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 ZNF784Q8NCA9 323 aaPredicted RBP12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SPCS1Q9Y6A9 102 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 VSIG10L2P0DP72 767 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 SAMD13Q5VXD3 122 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 LRRC37A3O60309 1634 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 DOCK7Q96N67 2140 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 CFAP161Q6P656 301 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 NIT1Q86X76 327 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 NRIP2Q9BQI9 281 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 KIF26BQ2KJY2 2108 aa12.74□□□□□ -0.37
TNFRSF11A-202ENST00000586569 LSM6P62312 80 aaKnown RBP12.73□□□□□ -0.37
TNFRSF11A-202ENST00000586569 TPRX1Q8N7U7 411 aa12.73□□□□□ -0.37
TNFRSF11A-202ENST00000586569 C14orf144Q96I85 54 aa12.73□□□□□ -0.37
TNFRSF11A-202ENST00000586569 ANAPC13Q9BS18 74 aa12.73□□□□□ -0.37
TNFRSF11A-202ENST00000586569 GPR6P46095 362 aaPredicted RBP12.73□□□□□ -0.37
TNFRSF11A-202ENST00000586569 LCN2P80188 198 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms