RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 ZP1P60852 638 aa13.9□□□□□ -0.18
TOP3A-220ENST00000585031 PITPNAQ00169 270 aa13.9□□□□□ -0.18
TOP3A-220ENST00000585031 ZNF79Q15937 498 aa13.9□□□□□ -0.18
TOP3A-220ENST00000585031 ZNF565Q8N9K5 539 aa13.9□□□□□ -0.18
TOP3A-220ENST00000585031 SETD6Q8TBK2 473 aa13.9□□□□□ -0.18
TOP3A-220ENST00000585031 SOSTQ9BQB4 213 aa13.9□□□□□ -0.18
TOP3A-220ENST00000585031 ZNF581Q9P0T4 197 aa13.9□□□□□ -0.18
TOP3A-220ENST00000585031 IGHV4OR15-8A0A075B7B6 117 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 A0A087WW49 117 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 MOSP00540 346 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 EIF4EP06730 217 aaKnown RBP13.89□□□□□ -0.19
TOP3A-220ENST00000585031 RAB3AP20336 220 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 CD1BP29016 333 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 BDKRB2P30411 391 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 RAB9AP51151 201 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 RSBN1Q5VWQ0 802 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-220ENST00000585031 TRIQKQ629K1 86 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 STEAP3Q658P3 488 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 PYHIN1Q6K0P9 492 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 POC5Q8NA72 575 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 CHST4Q8NCG5 386 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 OR6M1Q8NGM8 313 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 OR5H6Q8NGV6 325 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 UBALD1Q8TB05 177 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 RTN4IP1Q8WWV3 396 aaPredicted RBP13.89□□□□□ -0.19
TOP3A-220ENST00000585031 PP6455Q8WZ26 134 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 C10orf35Q96D05 121 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 VPS13DQ5THJ4 4388 aa13.89□□□□□ -0.19
TOP3A-220ENST00000585031 FAM90A10PA6NDY2 464 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 IL7P13232 177 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 INPP1P49441 399 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 IFITM3Q01628 133 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 TMEM65Q6PI78 240 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 UTS2BQ765I0 119 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 CENPSQ8N2Z9 138 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 CASTOR1Q8WTX7 329 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 C15orf40Q8WUR7 153 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 RITA1Q96K30 269 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 SDHCQ99643 169 aaPredicted RBP13.88□□□□□ -0.19
TOP3A-220ENST00000585031 TOLLIPQ9H0E2 274 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 NCOR1P1Q9H4R4 102 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 NEK6Q9HC98 313 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 TMEM138Q9NPI0 162 aa13.88□□□□□ -0.19
TOP3A-220ENST00000585031 A0A0B4J203 849 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 LINC01619G3V211 115 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 SLC31A2O15432 143 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 MAGEB3O15480 346 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 SOX15O60248 233 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 PTTG1O95997 202 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 IFNA6P05013 189 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 OCMP0CE72 109 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-220ENST00000585031 PRKACBP22694 351 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 Q6ZNX1 250 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 LYPD6Q86Y78 171 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 SNX29P2Q8IUI4 249 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 CDH26Q8IXH8 852 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 Q8N402 240 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 JAGN1Q8N5M9 183 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 LINC00476Q8WZB0 136 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 S100A16Q96FQ6 103 aaKnown RBP13.87□□□□□ -0.19
TOP3A-220ENST00000585031 OR51J1Q9H342 316 aa13.87□□□□□ -0.19
TOP3A-220ENST00000585031 ZNF107Q9UII5 783 aaPredicted RBP13.87□□□□□ -0.19
TOP3A-220ENST00000585031 ATP6V0E1O15342 81 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 SULT1B1O43704 296 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 TPPPO94811 219 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 CD37P11049 281 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 HTR2CP28335 458 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 OXA1LQ15070 435 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 PAN3Q58A45 887 aaKnown RBP13.86□□□□□ -0.19
TOP3A-220ENST00000585031 C1orf100Q5SVJ3 147 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 HACD4Q5VWC8 232 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 LINC00311Q8N616 119 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 DDB2Q92466 427 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 FAM110AQ9BQ89 295 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 UQCC2Q9BRT2 126 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 RHBDL2Q9NX52 303 aa13.86□□□□□ -0.19
TOP3A-220ENST00000585031 IGLV1-51P01701 117 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 OR8U9P0C7N5 309 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 OR5H8P0DN80 308 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 CNTFRP26992 372 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 CLDN12P56749 244 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 P2RY14Q15391 338 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 ZNF529Q6P280 563 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 OR10A7Q8NGE5 316 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 OR8H1Q8NGG4 311 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 OR13C9Q8NGT0 318 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 FAM3DQ96BQ1 224 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 FBXO7Q9Y3I1 522 aa13.85□□□□□ -0.19
TOP3A-220ENST00000585031 IGHV7-81A0A0B4J1V7 117 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 IGHV3-43A0A0B4J1X8 118 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 C15orf65H3BRN8 121 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 HSPA12AO43301 675 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 IGHV3-43DP0DP04 118 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 MRPS10P82664 201 aaKnown RBP13.84□□□□□ -0.19
TOP3A-220ENST00000585031 BAK1Q16611 211 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 C19orf54Q5BKX5 351 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 SGPP2Q8IWX5 399 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 SAXO1Q8IYX7 474 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 OR51A2Q8NGJ7 313 aa13.84□□□□□ -0.19
TOP3A-220ENST00000585031 SPSB1Q96BD6 273 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms