RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 PARP12Q9H0J9 701 aaKnown RBP11.17□□□□□ -0.62
TRAF4-215ENST00000584944 IFI27L2Q9H2X8 130 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 ESM1Q9NQ30 184 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 KLK11Q9UBX7 282 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 MTFP1Q9UDX5 166 aa11.17□□□□□ -0.62
TRAF4-215ENST00000584944 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 CTDSPLO15194 276 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 GPR137BO60478 399 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 TUSC2O75896 110 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 SNRNP70P08621 437 aaKnown RBP11.16□□□□□ -0.62
TRAF4-215ENST00000584944 CD24P25063 80 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 PTBP1P26599 531 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAF4-215ENST00000584944 MC5RP33032 325 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 ZNF137PP52743 207 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 RPL15P61313 204 aaKnown RBP11.16□□□□□ -0.62
TRAF4-215ENST00000584944 HNF4GQ14541 408 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 RPL39P5Q59GN2 51 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 LDLRAD2Q5SZI1 272 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 TMEM219Q86XT9 240 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 Q8N402 240 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 OR4C13Q8NGP0 309 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 OR6Q1Q8NGQ2 317 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 OR2T10Q8NGZ9 312 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 ZNF2Q9BSG1 426 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-215ENST00000584944 SLC5A7Q9GZV3 580 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 TCF19Q9Y242 345 aa11.16□□□□□ -0.62
TRAF4-215ENST00000584944 A0A1W2PPI3 338 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.62
TRAF4-215ENST00000584944 M0QZK8 103 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 RAB3DO95716 219 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 PPYP01298 95 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 NAT1P18440 290 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 AADACP22760 399 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 CD1BP29016 333 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 FAUP35544 74 aaKnown RBP11.15□□□□□ -0.62
TRAF4-215ENST00000584944 DYRK1AQ13627 763 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 DIAPH2-AS1Q14236 149 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 MEF2DQ14814 521 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 RTL8BQ17RB0 113 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 TRIQKQ629K1 86 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 C12orf54Q6X4T0 127 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 ZNF833PQ6ZTB9 187 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 CMTM1Q8IZ96 169 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 ZNF645Q8N7E2 425 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 ST6GALNAC6Q969X2 333 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 ADTRPQ96IZ2 230 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 AGMATQ9BSE5 352 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 THAP7Q9BT49 309 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-215ENST00000584944 MRPL20Q9BYC9 149 aaKnown RBP11.15□□□□□ -0.62
TRAF4-215ENST00000584944 TOLLIPQ9H0E2 274 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 PTTG2Q9NZH5 202 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 PRELID3BQ9Y3B1 194 aa11.15□□□□□ -0.62
TRAF4-215ENST00000584944 OR5H14A6NHG9 310 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 DISC1C4P0D8 188 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 M0QYG6 137 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 GSTZ1O43708 216 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-215ENST00000584944 PEX14O75381 377 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 MOSP00540 346 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 CD3DP04234 171 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 STEAP1BQ6NZ63 245 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 LPCAT3Q6P1A2 487 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 C16orf82Q7Z2V1 217 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 CCDC190Q86UF4 302 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 THNSL2Q86YJ6 484 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 TMEM229BQ8NBD8 167 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 DRAXINQ8NBI3 349 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-215ENST00000584944 GIMAP1Q8WWP7 306 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 SLC25A33Q9BSK2 321 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 MCUBQ9NWR8 336 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 C1RLQ9NZP8 487 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 ZNF107Q9UII5 783 aaPredicted RBP11.14□□□□□ -0.63
TRAF4-215ENST00000584944 ANAPC10Q9UM13 185 aa11.14□□□□□ -0.63
TRAF4-215ENST00000584944 AMY2AP04746 511 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 AKAIN1P0CW23 69 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 PGAM2P15259 253 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 THBS3P49746 956 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 COMPP49747 757 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-215ENST00000584944 TAGLNQ01995 201 aaKnown RBP11.13□□□□□ -0.63
TRAF4-215ENST00000584944 ZNF45Q02386 682 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 LSAMPQ13449 338 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 PLGLAQ15195 96 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 TUSC1Q2TAM9 212 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 SCGB2B2Q4G0G5 96 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 ABCA11PQ4W5N1 156 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 ZNF57Q68EA5 555 aaPredicted RBP11.13□□□□□ -0.63
TRAF4-215ENST00000584944 LYSMD2Q8IV50 215 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 ODF3L1Q8IXM7 274 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 TOMM5Q8N4H5 51 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 ARRDC1Q8N5I2 433 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 POC5Q8NA72 575 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 OR4F5Q8NH21 305 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 S100ZQ8WXG8 99 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 ZNF251Q9BRH9 671 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 SDHAF2Q9NX18 166 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 KIAA1456Q9P272 454 aa11.13□□□□□ -0.63
TRAF4-215ENST00000584944 WASHC3Q9Y3C0 194 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms