RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	CD200R1L	Q6Q8B3	271 aa		11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	MOB1B	Q7L9L4	216 aa		11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	GRPEL2	Q8TAA5	225 aa		11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	FLYWCH2	Q96CP2	140 aa	Known RBP	11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	C11orf54	Q9H0W9	315 aa	Predicted RBP	11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	ZNF355P	Q9NSJ1	428 aa		11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	PLEKHJ1	Q9NW61	149 aa		11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	AK3	Q9UIJ7	227 aa		11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	RNF150	Q9ULK6	438 aa		11.65	□□□□□ -0.54
SREBF1-222	ENST00000583732	SOCS1	O15524	211 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	HSPA12A	O43301	675 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	CPE	P16870	476 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	MC5R	P33032	325 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	CEACAM6	P40199	344 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	LINC00205	P59089	165 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	P2RY14	Q15391	338 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	C1orf100	Q5SVJ3	147 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	PACRGL	Q8N7B6	248 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	KCNG3	Q8TAE7	436 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	TM2D1	Q9BX74	207 aa		11.64	□□□□□ -0.55
SREBF1-222	ENST00000583732	TMEM14DP	A8MWL7	114 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	RBBP9	O75884	186 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	CD40LG	P29965	261 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	RPS16	P62249	146 aa	Known RBP	11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	DEFA5	Q01523	94 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	HSD17B12	Q53GQ0	312 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	AKIRIN2	Q53H80	203 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	CEACAM19	Q7Z692	300 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	OR5AN1	Q8NGI8	311 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	RHOV	Q96L33	236 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	LYST	Q99698	3801 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	ELOVL1	Q9BW60	279 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	LPAR5	Q9H1C0	372 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	STUB1	Q9UNE7	303 aa		11.63	□□□□□ -0.55
SREBF1-222	ENST00000583732	ANKRD34B	A5PLL1	514 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	EBAG9	O00559	213 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	SLC22A1	O15245	554 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	SLC25A17	O43808	307 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	IGKV1-16	P04430	117 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	SCT	P09683	121 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	IGHV4-30-4	P0DP06	118 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	ZBTB25	P24278	435 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	QRFP	P83859	136 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	RCN1	Q15293	331 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	ZNF562	Q6V9R5	426 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	ANKRD13B	Q86YJ7	626 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	MS4A15	Q8N5U1	240 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	ZNF383	Q8NA42	475 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	OR5T1	Q8NG75	326 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	OR6M1	Q8NGM8	313 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	EDARADD	Q8WWZ3	215 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	PHYHIP	Q92561	330 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	TSNAX	Q99598	290 aa	Known RBP	11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	AGMAT	Q9BSE5	352 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	MND1	Q9BWT6	205 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	SLA2	Q9H6Q3	261 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	C8orf4	Q9NR00	106 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	PLCXD1	Q9NUJ7	323 aa		11.62	□□□□□ -0.55
SREBF1-222	ENST00000583732	STARD9	Q9P2P6	4700 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	C13orf42	A0A1B0GVH6	325 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	ITGB1BP1	O14713	200 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	ARPC1B	O15143	372 aa	Known RBP	11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	BPNT1	O95861	308 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	APOA2	P02652	100 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	TFAP2A	P05549	437 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	SRM	P19623	302 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	FXYD3	Q14802	87 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	SGPP2	Q8IWX5	399 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	POC5	Q8NA72	575 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	CITED4	Q96RK1	184 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	URM1	Q9BTM9	101 aa	Known RBP	11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	RIMS4	Q9H426	269 aa	Predicted RBP	11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	PLGRKT	Q9HBL7	147 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	FKBP14	Q9NWM8	211 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	ZNF221	Q9UK13	617 aa		11.61	□□□□□ -0.55
SREBF1-222	ENST00000583732	TRBV6-6	A0A0A6YYG2	114 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732		M0R1X1	148 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	LDLRAD4	O15165	306 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	PROP1	O75360	226 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	SPDEF	O95238	335 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	CNIH1	O95406	144 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	IGLV1-51	P01701	117 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	CDK1	P06493	297 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	ARSB	P15848	533 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	VEGFC	P49767	419 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	MED22	Q15528	200 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	PDPN	Q86YL7	162 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732		Q8N1Y9	231 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	FBLIM1	Q8WUP2	373 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	TMEM203	Q969S6	136 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	ARHGAP5-AS1	Q96IT6	56 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	GFI1	Q99684	422 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	RNF5	Q99942	180 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	TM2D3	Q9BRN9	247 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732		Q9N2K0	584 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	C12orf4	Q9NQ89	552 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	SLC35D1	Q9NTN3	355 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	TENM2	Q9NT68	2774 aa		11.6	□□□□□ -0.55
SREBF1-222	ENST00000583732	IGKV1-6	A0A0C4DH72	117 aa		11.59	□□□□□ -0.55
SREBF1-222	ENST00000583732	PTGES3L	E9PB15	166 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms