RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 EXOSC2Q13868 293 aaKnown RBP8.28□□□□□ -1.08
CASC3-208ENST00000583649 FAM106AQ4KMX7 169 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 RAB12Q6IQ22 244 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 PDPNQ86YL7 162 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 OR5AN1Q8NGI8 311 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 NRBF2Q96F24 287 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 EXOSC1Q9Y3B2 195 aaKnown RBP8.28□□□□□ -1.08
CASC3-208ENST00000583649 PEX16Q9Y5Y5 336 aa8.28□□□□□ -1.08
CASC3-208ENST00000583649 ABCA13Q86UQ4 5058 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 J3QLW9 94 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 BMPR1BO00238 502 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 SCAF4O95104 1147 aaKnown RBP8.27□□□□□ -1.09
CASC3-208ENST00000583649 SCTP09683 121 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 CT45A6P0DMU7 189 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 CT45A5P0DMU8 189 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 CT45A7P0DMV0 189 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 ZNF19P17023 458 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 NANOS3P60323 173 aaKnown RBP8.27□□□□□ -1.09
CASC3-208ENST00000583649 EFNB1P98172 346 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 ZNF85Q03923 595 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 GNMTQ14749 295 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 SLC22A6Q4U2R8 563 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 HS3ST5Q8IZT8 346 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 TMEM61Q8N0U2 210 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 OR2C3Q8N628 320 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 OR5AK2Q8NH90 309 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 TMEM138Q9NPI0 162 aa8.27□□□□□ -1.09
CASC3-208ENST00000583649 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.26□□□□□ -1.09
CASC3-208ENST00000583649 ZNF320A2RRD8 509 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 SNTNA6NMZ2 147 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 OR4C45A6NMZ5 311 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 OR9G9P0C7N8 305 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 NANOS2P60321 138 aaKnown RBP8.26□□□□□ -1.09
CASC3-208ENST00000583649 RHOGP84095 191 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 DDI2Q5TDH0 399 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 C12orf73Q69YU5 71 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 DMKNQ6E0U4 476 aaPredicted RBP8.26□□□□□ -1.09
CASC3-208ENST00000583649 GLDNQ6ZMI3 551 aaPredicted RBP8.26□□□□□ -1.09
CASC3-208ENST00000583649 GAPTQ8N292 157 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 MAPKAPK5-AS1Q8N8E1 139 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 NECAP1Q8NC96 275 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 IL1F10Q8WWZ1 152 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 EDARADDQ8WWZ3 215 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 MARC2Q969Z3 335 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 RARRES2Q99969 163 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 PARP12Q9H0J9 701 aaKnown RBP8.26□□□□□ -1.09
CASC3-208ENST00000583649 IFI27L2Q9H2X8 130 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 C11orf68Q9H3H3 251 aaKnown RBP8.26□□□□□ -1.09
CASC3-208ENST00000583649 ZNF581Q9P0T4 197 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 VPS13DQ5THJ4 4388 aa8.26□□□□□ -1.09
CASC3-208ENST00000583649 FAM90A7PA6NKC0 464 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 ZAR1LA6NP61 321 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 FAM90A23PA8MXZ1 464 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 M0R129 80 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 ST8SIA5O15466 376 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 P0DMU3 169 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 FAM231AP0DMU4 169 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 FAM231CP0DMU5 169 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 CTRB1P17538 263 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 FUT3P21217 361 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 MFAP2P55001 183 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 RIPK1Q13546 671 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 RPL39P5Q59GN2 51 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 CTRB2Q6GPI1 263 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 SLC25A42Q86VD7 318 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 GPHB5Q86YW7 130 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 OR8J1Q8NGP2 316 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 GALNT14Q96FL9 552 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 C4orf36Q96KX1 117 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 ARGLU1Q9NWB6 273 aaPredicted RBP8.25□□□□□ -1.09
CASC3-208ENST00000583649 APLNQ9ULZ1 77 aa8.25□□□□□ -1.09
CASC3-208ENST00000583649 AQP12BA6NM10 295 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 H3BNX3 289 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 CREBL2O60519 120 aaPredicted RBP8.24□□□□□ -1.09
CASC3-208ENST00000583649 SC5DO75845 299 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 ACTL6BO94805 426 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 BDKRB2P30411 391 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 ADMP35318 185 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 DEFA5Q01523 94 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 AQP12AQ8IXF9 295 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 ACBD7Q8N6N7 88 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 UXS1Q8NBZ7 420 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 NSL1Q96IY1 281 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 SPAG8Q99932 426 aaPredicted RBP8.24□□□□□ -1.09
CASC3-208ENST00000583649 AKIP1Q9NQ31 210 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 CKLFQ9UBR5 152 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 ZNF230Q9UIE0 474 aaPredicted RBP8.24□□□□□ -1.09
CASC3-208ENST00000583649 ZNF221Q9UK13 617 aa8.24□□□□□ -1.09
CASC3-208ENST00000583649 UBE2QL1A1L167 161 aa8.23□□□□□ -1.09
CASC3-208ENST00000583649 MPTX1A8MV57 137 aa8.23□□□□□ -1.09
CASC3-208ENST00000583649 ITGB1BP1O14713 200 aa8.23□□□□□ -1.09
CASC3-208ENST00000583649 OR2C1O95371 312 aa8.23□□□□□ -1.09
CASC3-208ENST00000583649 MYOD1P15172 320 aa8.23□□□□□ -1.09
CASC3-208ENST00000583649 DAPP51397 102 aa8.23□□□□□ -1.09
CASC3-208ENST00000583649 TAGLNQ01995 201 aaKnown RBP8.23□□□□□ -1.09
CASC3-208ENST00000583649 LAMTOR1Q6IAA8 161 aa8.23□□□□□ -1.09
CASC3-208ENST00000583649 ZNF529Q6P280 563 aa8.23□□□□□ -1.09
CASC3-208ENST00000583649 ADGRG5Q8IZF4 528 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms