RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 APOBEC3AP31941 199 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 NHLH2Q02577 135 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 IL13RA2Q14627 380 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ZNF695Q8IW36 515 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TPRX1Q8N7U7 411 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 OR8U1Q8NH10 309 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 OR10J5Q8NHC4 309 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SH3BGRL3Q9H299 93 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TRAPPC2LQ9UL33 140 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RBM7Q9Y580 266 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SVEP1Q4LDE5 3571 aa10.6□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LYNX1G3V0Z9 82 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 HSPA12AO43301 675 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LY6HO94772 140 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 HAND1O96004 215 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CD5P06127 495 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 LYNX1P0DP58 116 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CD80P33681 288 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SSX8Q7RTT4 187 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MUC15Q8N387 334 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RIMS4Q9H426 269 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 WFDC1Q9HC57 220 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 HES4Q9HCC6 221 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 DYNLRB1Q9NP97 96 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ZDHHC8Q9ULC8 765 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PPP1R3CQ9UQK1 317 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SPG11Q96JI7 2443 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ARFGEF3Q5TH69 2177 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 FAM157AC9JC47 383 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 S100A6P06703 90 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 SELLP14151 372 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 TAGLN2P37802 199 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ZNF146Q15072 292 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 ZNF672Q499Z4 452 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 DUX4L9Q6RFH8 374 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CMTM1Q8IZ96 169 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CD177Q8N6Q3 437 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 PLPPR1Q8TBJ4 325 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CCL17Q92583 94 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 C18orf12Q96KH6 178 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 MAGT1Q9H0U3 335 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 IL19Q9UHD0 177 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 RCL1Q9Y2P8 373 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 VPS13CQ709C8 3753 aa10.59□□□□□ -0.71
CDK5RAP3-217ENST00000580287 CTXN2P0C2S0 81 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OMGP23515 440 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 Q6ZRG5 221 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 Q6ZS49 121 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 HSD17B11Q8NBQ5 300 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TMEM222Q9H0R3 208 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CACFD1Q9UGQ2 172 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 PGPEP1LA6NFU8 196 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SRRM5B3KS81 715 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 H7C1Q1 480 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 PSG2P11465 335 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 AGAP20933 346 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 GABRA2P47869 451 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 HLA-DRB3P79483 266 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 FABP9Q0Z7S8 132 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 BTNL8Q6UX41 500 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 Q8IYB0 196 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 FAM185AQ8N0U4 392 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ZNRF1Q8ND25 227 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OR51H1Q8NH63 302 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OR51M1Q9H341 326 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SAP30LQ9HAJ7 183 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 OR1A1Q9P1Q5 309 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 MIOXQ9UGB7 285 aa10.58□□□□□ -0.72
CDK5RAP3-217ENST00000580287 IGKV1D-17A0A075B6S4 117 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SH2D1BO14796 132 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SOD3P08294 240 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 COL10A1Q03692 680 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SRSF1Q07955 248 aaKnown RBP eCLIP10.57□□□□□ -0.724e-7■■□□□ 14.4
CDK5RAP3-217ENST00000580287 AESQ08117 197 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 LRTM2Q8N967 370 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 AKR1E2Q96JD6 320 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TMED3Q9Y3Q3 217 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CELSR2Q9HCU4 2923 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 E5RGE8 158 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ST8SIA3O43173 380 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TNFSF4P23510 183 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ZNF616Q08AN1 781 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SRSF7Q16629 238 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 FGFRL1Q8N441 504 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 EDARADDQ8WWZ3 215 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 TMEM204Q9BSN7 226 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 RPS10P5Q9NQ39 176 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 METTL1Q9UBP6 276 aaKnown RBP10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 KCNS2Q9ULS6 477 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 NSG2Q9Y328 171 aa10.57□□□□□ -0.72
CDK5RAP3-217ENST00000580287 LHBP01229 141 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 PRDX2P32119 198 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 SRPXP78539 464 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 CLINT1Q14677 625 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 IZUMO4Q1ZYL8 232 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 RNF212Q495C1 297 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 FAM53AQ6NSI3 398 aaPredicted RBP10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 ZNF561Q8N587 486 aa10.56□□□□□ -0.72
CDK5RAP3-217ENST00000580287 DCTN5Q9BTE1 182 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms