RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PMS2P11Q13670 270 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 GNMTQ14749 295 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 SCGB2B2Q4G0G5 96 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 DCAF12L2Q5VW00 463 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 CYB5R2Q6BCY4 276 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 CIARTQ8N365 385 aaPredicted RBP6.52□□□□□ -1.37
COPS3-215ENST00000578317 RNF152Q8N8N0 203 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 ZDHHC22Q8N966 263 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 OR2AK2Q8NG84 335 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 OR10V1Q8NGI7 309 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 OR13D1Q8NGV5 346 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 ZFAND1Q8TCF1 268 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 CHPT1Q8WUD6 406 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 UPRTQ96BW1 309 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 ZNF486Q96H40 463 aaPredicted RBP6.52□□□□□ -1.37
COPS3-215ENST00000578317 AKR1E2Q96JD6 320 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 MARVELD1Q9BSK0 173 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 ALX4Q9H161 411 aaPredicted RBP6.52□□□□□ -1.37
COPS3-215ENST00000578317 PIPOXQ9P0Z9 390 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 NUBP2Q9Y5Y2 271 aa6.52□□□□□ -1.37
COPS3-215ENST00000578317 IGHV2-26A0A0B4J1V2 119 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 IGHV3-43A0A0B4J1X8 118 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 TOX4O94842 621 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 TGFAP01135 160 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 IGLV2-14P01704 120 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 OR8U9P0C7N5 309 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 IGHV3-43DP0DP04 118 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 CCR6P51684 374 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 UBE2E1P51965 193 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 HERV-K104P61576 105 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 LTC4SQ16873 150 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 XP32Q5T750 250 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 FAM53AQ6NSI3 398 aaPredicted RBP6.51□□□□□ -1.37
COPS3-215ENST00000578317 PLET1Q6UQ28 207 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 GLCCI1Q86VQ1 547 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 SLC38A6Q8IZM9 456 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.51□□□□□ -1.37
COPS3-215ENST00000578317 OR8U1Q8NH10 309 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 ENKURQ8TC29 256 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 CREB3L1Q96BA8 519 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 TBX15Q96SF7 602 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 RTBDNQ9BSG5 229 aaPredicted RBP6.51□□□□□ -1.37
COPS3-215ENST00000578317 ABHD14AQ9BUJ0 271 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 CLEC7AQ9BXN2 247 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 PARP12Q9H0J9 701 aaKnown RBP6.51□□□□□ -1.37
COPS3-215ENST00000578317 LPAR2Q9HBW0 351 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 AUP1Q9Y679 476 aa6.51□□□□□ -1.37
COPS3-215ENST00000578317 IGKV1D-13A0A0B4J2D9 117 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 RAB29O14966 203 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 PROP1O75360 226 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 CTSDP07339 412 aaPredicted RBP6.5□□□□□ -1.37
COPS3-215ENST00000578317 IGKV1-13P0DP09 117 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 BPIFB3P59826 476 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 RND3P61587 244 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 UTF1Q5T230 341 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 ZNF626Q68DY1 528 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 HCP5Q6MZN7 132 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 FAM71F2Q6NXP2 309 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 FAHD2BQ6P2I3 314 aaPredicted RBP6.5□□□□□ -1.37
COPS3-215ENST00000578317 CCBE1Q6UXH8 406 aaPredicted RBP6.5□□□□□ -1.37
COPS3-215ENST00000578317 VMO1Q7Z5L0 202 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 LDLRAD3Q86YD5 345 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 CMTM1Q8IZ96 169 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 ZNF645Q8N7E2 425 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 MAPK1IP1LQ8NDC0 245 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 MARCH1Q8TCQ1 289 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 ST6GALNAC6Q969X2 333 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 FAHD2AQ96GK7 314 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 SUCNR1Q9BXA5 334 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 SLC5A7Q9GZV3 580 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 IFI27L2Q9H2X8 130 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 C5orf66Q9H5L9 145 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 ITGB1BP2Q9UKP3 347 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 FLNAP21333 2647 aaKnown RBP6.5□□□□□ -1.37
COPS3-215ENST00000578317 CENPVL3A0A0U1RRI6 287 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 ODF3BA8MYP8 253 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 RNASEK-C17orf49H0YIS7 233 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 LY6LH3BQJ8 138 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 BUB1B-PAK6H3BSN5 160 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 GPR31O00270 319 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 TOR1AO14656 332 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 SLC31A2O15432 143 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 FXYD4P59646 89 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 UBE2MP61081 183 aaKnown RBP6.5□□□□□ -1.37
COPS3-215ENST00000578317 DHODHQ02127 395 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 HLA-DRB5Q30154 266 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 MIDNQ504T8 468 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 PRR31Q5SQ13 230 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 MINOS1Q5TGZ0 78 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 SLC25A42Q86VD7 318 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 ODF3L1Q8IXM7 274 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 SECTM1Q8WVN6 248 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 LEAP2Q969E1 77 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 ZNF251Q9BRH9 671 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 PCGF1Q9BSM1 259 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 FXYD6Q9H0Q3 95 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 MMP28Q9H239 520 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 SIRT7Q9NRC8 400 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 CCL28Q9NRJ3 127 aa6.5□□□□□ -1.37
COPS3-215ENST00000578317 ZNF221Q9UK13 617 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms