RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 OSGIN2Q9Y236 505 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 YLPM1P49750 1951 aaKnown RBP11.67□□□□□ -0.54
RNF43-202ENST00000577625 SHANK1Q9Y566 2161 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 A0A0G2JNJ9 132 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 A0A1B0GV50 99 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 CLDN34H7C241 214 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 SDCBPO00560 298 aaPredicted RBP11.67□□□□□ -0.54
RNF43-202ENST00000577625 BMP5P22003 454 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 CCKARP32238 428 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 RND3P61587 244 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 IGFBP7Q16270 282 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 MPV17LQ2QL34 196 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 NCR3LG1Q68D85 454 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 OR4X1Q8NH49 305 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 RTL8AQ9BWD3 113 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 PLK3Q9H4B4 646 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 C1orf123Q9NWV4 160 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 Q9UFV3 132 aa11.67□□□□□ -0.54
RNF43-202ENST00000577625 E5RGE8 158 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 OPRM1P35372 400 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 CEBPGP53567 150 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 HLA-DRB3P79483 266 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 PDCD1Q15116 288 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 BRICD5Q6PL45 260 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 OR10A7Q8NGE5 316 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 TMEM18Q96B42 140 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 DIRC2Q96SL1 478 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 SH3BGRL3Q9H299 93 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 WFDC1Q9HC57 220 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 NSG2Q9Y328 171 aa11.66□□□□□ -0.54
RNF43-202ENST00000577625 A0A1W2PPQ1 181 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 A8MXE2 369 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 PPP5D1E7EU14 171 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 J3QT63 122 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 GPR137BO60478 399 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 PI3P19957 117 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 RPL29P47914 159 aaKnown RBP11.65□□□□□ -0.54
RNF43-202ENST00000577625 PDLIM4P50479 330 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 GPR157Q5UAW9 335 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 TMEM211Q6ICI0 200 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 WDR86Q86TI4 376 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 LINC00596Q86U02 117 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 SGPP2Q8IWX5 399 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 DYRK2Q92630 601 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 ACY3Q96HD9 319 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 ZNF442Q9H7R0 627 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 IL36RNQ9UBH0 155 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 GAB2Q9UQC2 676 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 LSM5Q9Y4Y9 91 aaKnown RBP11.65□□□□□ -0.54
RNF43-202ENST00000577625 CHD3Q12873 2000 aaKnown RBP11.65□□□□□ -0.54
RNF43-202ENST00000577625 XKRY2A2RUG3 117 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 LRP5LA4QPB2 252 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 C1QTNF9BB2RNN3 333 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 OPN1MWP04001 364 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 C1QTNF9P0C862 333 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 OPN1MW2P0DN77 364 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 OPN1MW3P0DN78 364 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 BRS3P32247 399 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 TMEM182Q6ZP80 229 aaPredicted RBP11.65□□□□□ -0.54
RNF43-202ENST00000577625 C1orf174Q8IYL3 243 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 FAM185AQ8N0U4 392 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 CYB561D1Q8N8Q1 229 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 SH3BGRL2Q9UJC5 107 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 WSB1Q9Y6I7 421 aa11.65□□□□□ -0.54
RNF43-202ENST00000577625 NBASA2RRP1 2371 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 SIAH2O43255 324 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 TCF21O43680 179 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 ECI1P42126 302 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 ZNF83P51522 516 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 CCL20P78556 96 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 PNRC1Q12796 327 aaPredicted RBP11.64□□□□□ -0.55
RNF43-202ENST00000577625 IL13RA2Q14627 380 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 ZNF506Q5JVG8 444 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 MRGPRGQ86SM5 289 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 SRD5A3Q9H8P0 318 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 ICE1Q9Y2F5 2266 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 MED19A0JLT2 244 aaPredicted RBP11.64□□□□□ -0.55
RNF43-202ENST00000577625 CYB5R3P00387 301 aaPredicted RBP11.64□□□□□ -0.55
RNF43-202ENST00000577625 IFNA21P01568 189 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 RBMXP38159 391 aaKnown RBP11.64□□□□□ -0.55
RNF43-202ENST00000577625 CDKN1BP46527 198 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 COL10A1Q03692 680 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 FAM27E3Q08E93 113 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 ICAM4Q14773 271 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 SPSB3Q6PJ21 355 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 BTNL3Q6UXE8 466 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 ZNF705AQ6ZN79 300 aaPredicted RBP11.64□□□□□ -0.55
RNF43-202ENST00000577625 ZNF488Q96MN9 340 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 ZNF286AQ9HBT8 521 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 NECAP2Q9NVZ3 263 aa11.64□□□□□ -0.55
RNF43-202ENST00000577625 FAM221AA4D161 298 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 RHBDL1O75783 438 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 IL6RP08887 468 aaPredicted RBP11.63□□□□□ -0.55
RNF43-202ENST00000577625 KITLGP21583 273 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 C3orf36Q3SXR2 165 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 FAM58AQ8N1B3 248 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 OR10G4Q8NGN3 311 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 SVIPQ8NHG7 77 aa11.63□□□□□ -0.55
RNF43-202ENST00000577625 DECR2Q9NUI1 292 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms