RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 H0YL77 283 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 SIRPB1O00241 398 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 UPK1AO00322 258 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 MFNGO00587 321 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 MYL12BO14950 172 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 FABP7O15540 132 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 SNAPC5O75971 98 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 DIRAS1O95057 198 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 C1orf105O95561 183 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 HBZP02008 142 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 PFN1P07737 140 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR5G3P0C626 314 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 SMIM17P0DL12 118 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 MYL12AP19105 171 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 RAB5AP20339 215 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 CRHBPP24387 322 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 NFYBP25208 207 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 NPY1RP25929 384 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 PRDX3P30048 256 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 HRH1P35367 487 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 RPL4P36578 427 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 POLR2IP36954 125 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 CX3CR1P49238 355 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 SULT1A1P50225 295 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 SULT1A2P50226 295 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 GZMMP51124 257 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 FMODQ06828 376 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 HSD52Q0P140 79 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM267Q0VDI3 215 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 KLRB1Q12918 225 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF154Q13106 437 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 UNC119Q13432 240 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 PPP1R1AQ13522 171 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 FZD2Q14332 565 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF266Q14584 549 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 PAFAH1B3Q15102 231 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 GUSBP1Q15486 140 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 BATFQ16520 125 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 CLEC12AQ5QGZ9 265 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM69Q5SWH9 247 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OPN5Q6U736 354 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF705AQ6ZN79 300 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 Q6ZSR6 202 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 GOLGA7Q7Z5G4 137 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 IFNEQ86WN2 208 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNF547Q8IVP9 402 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 CA13Q8N1Q1 262 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 SPICQ8N5J4 248 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 TMEM252Q8N6L7 170 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 C5orf17Q8NAS9 161 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR4F6Q8NGB9 312 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR4K5Q8NGD3 323 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR6K2Q8NGY2 324 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR5B3Q8NH48 314 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR5K2Q8NHB8 316 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 ZNRF2Q8NHG8 242 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 CLDN23Q96B33 292 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 RCN3Q96D15 328 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 ADTRPQ96IZ2 230 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 CDX2Q99626 313 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 HSPB9Q9BQS6 159 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 PSMG3Q9BT73 122 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 SMIM3Q9BZL3 60 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 CHIAQ9BZP6 476 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 C20orf27Q9GZN8 174 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 SLIRPQ9GZT3 109 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 RNASE7Q9H1E1 156 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 MS4A6AQ9H2W1 248 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR51I2Q9H344 312 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 HRASLS2Q9NWW9 162 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 IL36GQ9NZH8 169 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 OR5AC2Q9NZP5 309 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 RIMS3Q9UJD0 308 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 FZR1Q9UM11 496 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 BOKQ9UMX3 212 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 HS3ST2Q9Y278 367 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 TP53TG1Q9Y2A0 90 aa2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 RCL1Q9Y2P8 373 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 RPL36Q9Y3U8 105 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-202ENST00000577300 TROQ12816 1431 aaPredicted RBP2.34□□□□□ -2.04
SMCHD1-202ENST00000577300 IQSEC2Q5JU85 1478 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 MAGI3Q5TCQ9 1506 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 ARAP3Q8WWN8 1544 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 LRP4O75096 1905 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 PNMA8CA0A1B0GUJ8 204 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 A0A1B0GW64 132 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 FABP5P3A8MUU1 101 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 H7BYZ3 331 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 PLPP1O14494 284 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 EIF4E2O60573 245 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 ZNF682O95780 498 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 AIFM1O95831 613 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 CLIC3O95833 236 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 IGF1P05019 195 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 CTSDP07339 412 aaPredicted RBP2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 SOD3P08294 240 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 OR4A8P0C604 315 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 OR4Q2P0C623 313 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 OR5AC1P0C628 307 aa2.33□□□□□ -2.04
SMCHD1-202ENST00000577300 TCN2P20062 427 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms