RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 CPEB3Q8NE35 698 aaKnown RBP12.33□□□□□ -0.44
SCARF1-209ENST00000576012 ABHD3Q8WU67 409 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 ZCCHC14Q8WYQ9 949 aaKnown RBP12.33□□□□□ -0.44
SCARF1-209ENST00000576012 TMEM54Q969K7 222 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 FOXB1Q99853 325 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 OR2J1Q9GZK6 312 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 FGF23Q9GZV9 251 aaPredicted RBP12.33□□□□□ -0.44
SCARF1-209ENST00000576012 DNAJC4Q9NNZ3 241 aa12.33□□□□□ -0.44
SCARF1-209ENST00000576012 RAMP3O60896 148 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 SERF1AO75920 110 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 NGFP01138 241 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 DCAF10Q5QP82 559 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 C10orf128Q5T292 105 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 VAMP8Q9BV40 100 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 ZNF552Q9H707 407 aaPredicted RBP12.32□□□□□ -0.44
SCARF1-209ENST00000576012 OR2W1Q9Y3N9 320 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 DNAJC13O75165 2243 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 CCR5P51681 352 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 RNF151Q2KHN1 245 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 MKXQ8IYA7 352 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 NEIL1Q96FI4 390 aaPredicted RBP12.32□□□□□ -0.44
SCARF1-209ENST00000576012 PYGO2Q9BRQ0 406 aa12.32□□□□□ -0.44
SCARF1-209ENST00000576012 CHCHD2Q9Y6H1 151 aaPredicted RBP12.32□□□□□ -0.44
SCARF1-209ENST00000576012 PI4KAP42356 2102 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 KIR2DS1A0A191URI9 304 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 LOC102725191A0A1B0GVB3 256 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 DUXBA0A1W2PPF3 345 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 TMEM210A6NLX4 147 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 BRS3P32247 399 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 KIR2DS4P43632 304 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 KIR2DS1Q14954 304 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 PCSK4Q6UW60 755 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 OR2H1Q9GZK4 316 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 TMEM38BQ9NVV0 291 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 RBFOX2O43251 390 aaKnown RBP eCLIP12.31□□□□□ -0.44
SCARF1-209ENST00000576012 CD46P15529 392 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 FOXG1P55316 489 aaPredicted RBP12.31□□□□□ -0.44
SCARF1-209ENST00000576012 RHBDD2Q6NTF9 364 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 TGIF2LYQ8IUE0 185 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 RHBDL1O75783 438 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 SERF2P84101 59 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 LTC4SQ16873 150 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 COA6Q5JTJ3 125 aaKnown RBP12.31□□□□□ -0.44
SCARF1-209ENST00000576012 MRPL21Q7Z2W9 205 aaKnown RBP12.31□□□□□ -0.44
SCARF1-209ENST00000576012 FGFRL1Q8N441 504 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 CISD2Q8N5K1 135 aaKnown RBP12.31□□□□□ -0.44
SCARF1-209ENST00000576012 TRAPPC2LQ9UL33 140 aa12.31□□□□□ -0.44
SCARF1-209ENST00000576012 A0A0G2JMM0 328 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 A0A1W2PPB8 328 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 A0A1W2PRS3 328 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 KIR3DP1A8MWS1 328 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 TP53I11O14683 189 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 ZG16O60844 167 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 TFF1P04155 84 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 PMCHP20382 165 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 ZNF90Q03938 601 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 C10orf35Q96D05 121 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 R3HDM4Q96D70 268 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 TMEM106BQ9NUM4 274 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 GVINP1Q7Z2Y8 2422 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 ZIC3O60481 467 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 GNB1P62873 340 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 OR8B8Q15620 311 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 ZNF573Q86YE8 665 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
SCARF1-209ENST00000576012 WNT10AQ9GZT5 417 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 FAM234AQ9H0X4 552 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
SCARF1-209ENST00000576012 IGHV1OR15-9A0A0B4J2B8 117 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 KITLGP21583 273 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 CD82P27701 267 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 IER3P46695 156 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 SLC25A53Q5H9E4 307 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 LINC01551Q86U37 167 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 SLC25A45Q8N413 288 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 TMEM9BQ9NQ34 198 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 SH2D1BO14796 132 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 IGHV3-13P01766 116 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 IGHV3-7P01780 117 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 CA6P23280 308 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 RAB7AP51149 207 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 TCL1AP56279 114 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 CADM4Q8NFZ8 388 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 CIB3Q96Q77 187 aaPredicted RBP12.29□□□□□ -0.44
SCARF1-209ENST00000576012 COL4A2P08572 1712 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 PRR14LQ5THK1 2151 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 LRP4O75096 1905 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 GGCTO75223 188 aaKnown RBP12.29□□□□□ -0.44
SCARF1-209ENST00000576012 CRISP2P16562 243 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 CEBPDP49716 269 aaPredicted RBP12.29□□□□□ -0.44
SCARF1-209ENST00000576012 PDLIM4P50479 330 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 ZNF585BQ52M93 769 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 WIPI1Q5MNZ9 446 aaPredicted RBP12.29□□□□□ -0.44
SCARF1-209ENST00000576012 ASCL4Q6XD76 172 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 WDYHV1Q96HA8 205 aa12.29□□□□□ -0.44
SCARF1-209ENST00000576012 KIR2DL5BA0A0G2JN68 375 aa12.28□□□□□ -0.44
SCARF1-209ENST00000576012 KIR2DL5BA0A0G2JPC4 375 aa12.28□□□□□ -0.44
SCARF1-209ENST00000576012 CTXND1A0A1B0GTU2 59 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms