RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 H3BNX3 289 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 BMPR1BO00238 502 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 SC5DO75845 299 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 BAG2O95816 211 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 IGKV1-16P04430 117 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 FUT3P21217 361 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 CALB2P22676 271 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 BMI1P35226 326 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 GBX2P52951 348 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 ZNF554Q86TJ5 538 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 WFDC3Q8IUB2 231 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 SYS1Q8N2H4 156 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 OR52B4Q8NGK2 314 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 GPR148Q8TDV2 347 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 ZNF184Q99676 751 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 SELENOIQ9C0D9 397 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 BANF2Q9H503 90 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 ZC4H2Q9NQZ6 224 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 IMPAD1Q9NX62 359 aa12.16□□□□□ -0.46
CTDNEP1-211ENST00000575783 C2orf70A6NJV1 201 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 GPX5O75715 221 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 T-ENOLP0DO92 83 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 GTF2A1P52655 376 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 LINC00205P59089 165 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 SSBP2P81877 361 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 GLIPR1L1Q6UWM5 242 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 LGALS12Q96DT0 336 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 TMEM68Q96MH6 324 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 MYCBPQ99417 103 aaPredicted RBP12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 ABRACLQ9P1F3 81 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 EXOGQ9Y2C4 368 aaKnown RBP12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 LRRC42Q9Y546 428 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 GMPPBQ9Y5P6 360 aa12.15□□□□□ -0.46
CTDNEP1-211ENST00000575783 DYNC1H1Q14204 4646 aaKnown RBP12.15□□□□□ -0.47
CTDNEP1-211ENST00000575783 MSGN1A6NI15 193 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 FAM90A23PA8MXZ1 464 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 SPDEFO95238 335 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 ATP6AP1Q15904 470 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 DEFB135Q30KP9 77 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 TMEM217Q8N7C4 229 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 TRUB1Q8WWH5 349 aaKnown RBP12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 MUL1Q969V5 352 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 PHB2Q99623 299 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 GABARAPL1Q9H0R8 117 aa12.14□□□□□ -0.47
CTDNEP1-211ENST00000575783 GLAP06280 429 aa12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 ATF4P18848 351 aaPredicted RBP12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 ATP5G2Q06055 141 aa12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 MRPL28Q13084 256 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 EXOSC2Q13868 293 aaKnown RBP12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 SIGIRRQ6IA17 410 aa12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 THRSPQ92748 146 aa12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 GABARAPL3Q9BY60 117 aa12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 MED4Q9NPJ6 270 aa12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 AASSQ9UDR5 926 aa12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 TP53TG1Q9Y2A0 90 aa12.13□□□□□ -0.47
CTDNEP1-211ENST00000575783 DNAH6Q9C0G6 4158 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 CRTAPO75718 401 aaPredicted RBP12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 SCAF4O95104 1147 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 PRH1P02810 166 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 MGMTP16455 207 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 RHOGP84095 191 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 HMGN3Q15651 99 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 TM4SF20Q53R12 229 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 Q6ZWC4 215 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 AMIGO2Q86SJ2 522 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 TMEM61Q8N0U2 210 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 JAGN1Q8N5M9 183 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 ZNF383Q8NA42 475 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 CACNG8Q8WXS5 425 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 AKIP1Q9NQ31 210 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 ERVK13-1Q9NX77 482 aa12.12□□□□□ -0.47
CTDNEP1-211ENST00000575783 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 PDCD6O75340 191 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 TUSC2O75896 110 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 APOC4P55056 127 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 MEDAGQ5VYS4 303 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 ZNF57Q68EA5 555 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 AWAT2Q6E213 333 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 OR14A2Q96R54 314 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 AGMATQ9BSE5 352 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 KRTAP4-5Q9BYR2 181 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 ZNF230Q9UIE0 474 aaPredicted RBP12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 POMPQ9Y244 141 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 DNAH11Q96DT5 4516 aa12.11□□□□□ -0.47
CTDNEP1-211ENST00000575783 DNAH17Q9UFH2 4485 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 FAM90A7PA6NKC0 464 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 SNTNA6NMZ2 147 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 PROP1O75360 226 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 OR2C1O95371 312 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 APOA2P02652 100 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 CBLN1P23435 193 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 SNRPGP62308 76 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 ANKRD55Q3KP44 614 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 SLC25A30Q5SVS4 291 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 PDPNQ86YL7 162 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 ADAD2Q8NCV1 583 aaKnown RBP12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 KCNG3Q8TAE7 436 aa12.1□□□□□ -0.47
CTDNEP1-211ENST00000575783 SETD6Q8TBK2 473 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms