RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MED12LQ86YW9 2145 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 ZNF808Q8N4W9 903 aaPredicted RBP13.16□□□□□ -0.3
NUP88-207ENST00000573584 OR1L1Q8NH94 360 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 IER2Q9BTL4 223 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 OR2J1Q9GZK6 312 aa13.16□□□□□ -0.3
NUP88-207ENST00000573584 WDFY4Q6ZS81 3184 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 PDGFBP01127 241 aaPredicted RBP13.15□□□□□ -0.3
NUP88-207ENST00000573584 TDGF1P13385 188 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 RPL30P62888 115 aaKnown RBP13.15□□□□□ -0.3
NUP88-207ENST00000573584 RTP5Q14D33 572 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 TBC1D28Q2M2D7 210 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 OR10P1Q8NGE3 313 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 SMOC1Q9H4F8 434 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.15□□□□□ -0.3
NUP88-207ENST00000573584 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 ODAMA1E959 279 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 GRPP07492 148 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 OR3A1P47881 315 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 CEBPDP49716 269 aaPredicted RBP13.15□□□□□ -0.3
NUP88-207ENST00000573584 RPS16P62249 146 aaKnown RBP13.15□□□□□ -0.3
NUP88-207ENST00000573584 FFAR4Q5NUL3 377 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 FBXW9Q5XUX1 488 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 FAM53AQ6NSI3 398 aaPredicted RBP13.15□□□□□ -0.3
NUP88-207ENST00000573584 TGIF2LYQ8IUE0 185 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 OR1P1Q8NH06 330 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 OR5R1Q8NH85 324 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 GALMQ96C23 342 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 ZPBPQ9BS86 351 aa13.15□□□□□ -0.3
NUP88-207ENST00000573584 ACTR3CQ9C0K3 210 aaPredicted RBP13.15□□□□□ -0.3
NUP88-207ENST00000573584 A0A087X0M5 115 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 A0A1B0GX30 115 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 RAC2P15153 192 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 COX5AP20674 150 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 ACP1P24666 158 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 KIAA2026Q5HYC2 2103 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 ZNF66Q6ZN08 573 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 ZBTB34Q8NCN2 500 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 PCGF1Q9BSM1 259 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 ELOVL1Q9BW60 279 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 DIDO1Q9BTC0 2240 aaKnown RBP13.14□□□□□ -0.31
NUP88-207ENST00000573584 XKRY2A2RUG3 117 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 PSPNO60542 156 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 S1PR2O95136 353 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 AMBPP02760 352 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 CELA3BP08861 270 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 SELEP16581 610 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 PMP22Q01453 160 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 JOSD1Q15040 202 aaPredicted RBP13.14□□□□□ -0.31
NUP88-207ENST00000573584 UNQ6494/PRO21346Q6UXR6 183 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 UBALD2Q8IYN6 164 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 DTD1Q8TEA8 209 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 RAB24Q969Q5 203 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 MANBALQ9NQG1 85 aa13.14□□□□□ -0.31
NUP88-207ENST00000573584 A0A1W2PPQ1 181 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 DVL1O14640 695 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 ZG16O60844 167 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 HAND1O96004 215 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 P0C879 139 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 PPP1CBP62140 327 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 ALKBH6Q3KRA9 238 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 REC114Q7Z4M0 266 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 OR52L2PQ8NGH6 319 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 C5orf30Q96GV9 206 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 MEGF10Q96KG7 1140 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 TMEM30CPA0ZSE6 113 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 C12orf77C9JDV5 145 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 TFF3Q07654 80 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 DCAF10Q5QP82 559 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 SSX9Q7RTT3 188 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 NPCDR1Q9BY65 106 aa13.13□□□□□ -0.31
NUP88-207ENST00000573584 C9orf172C9J069 976 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 LAMTOR5O43504 91 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 PAGE4O60829 102 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 RBMXL2O75526 392 aaKnown RBP13.12□□□□□ -0.31
NUP88-207ENST00000573584 HRASP01112 189 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 GZMBP10144 247 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 CATR1Q13166 79 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 P2RY6Q15077 328 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 RNASEH2CQ8TDP1 164 aaKnown RBP13.12□□□□□ -0.31
NUP88-207ENST00000573584 SPRY4Q9C004 299 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 C17orf98A8MV24 154 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 SMPD2O60906 423 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 MEOX1P50221 254 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 IDH3GP51553 393 aaPredicted RBP13.12□□□□□ -0.31
NUP88-207ENST00000573584 FAM3BP58499 235 aaPredicted RBP13.12□□□□□ -0.31
NUP88-207ENST00000573584 MRPL49Q13405 166 aaKnown RBP13.12□□□□□ -0.31
NUP88-207ENST00000573584 BTNL3Q6UXE8 466 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 ANAPC16Q96DE5 110 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 IFNA10P01566 189 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 GYPAP02724 150 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 BRWD1-AS2P59051 145 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 FOXJ2Q9P0K8 574 aa13.12□□□□□ -0.31
NUP88-207ENST00000573584 KMT2EQ8IZD2 1858 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 DEFA4P12838 97 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 AESQ08117 197 aa13.11□□□□□ -0.31
NUP88-207ENST00000573584 EIF4EBP1Q13541 118 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms