RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 GIMAP1Q8WWP7 306 aa17.7■□□□□ 0.42
RAB40B-207ENST00000572603 TINAGL1Q9GZM7 467 aaPredicted RBP17.7■□□□□ 0.42
RAB40B-207ENST00000572603 SDHAF2Q9NX18 166 aa17.7■□□□□ 0.42
RAB40B-207ENST00000572603 GAB2Q9UQC2 676 aa17.7■□□□□ 0.42
RAB40B-207ENST00000572603 BTBD17A6NE02 478 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 J3QRK9 145 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 CHST1O43916 411 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 IGLV2-14P01704 120 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 TBPP20226 339 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 BRS3P32247 399 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 LUMP51884 338 aaPredicted RBP17.69■□□□□ 0.42
RAB40B-207ENST00000572603 ARHGDIBP52566 201 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 DHRS11Q6UWP2 260 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 LINC00299Q6ZSB3 139 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 MOB3BQ86TA1 216 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 RBMXL1Q96E39 390 aaKnown RBP17.69■□□□□ 0.42
RAB40B-207ENST00000572603 S1PR3Q99500 378 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 SDHCQ99643 169 aaPredicted RBP17.69■□□□□ 0.42
RAB40B-207ENST00000572603 FXYD6Q9H0Q3 95 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 AKIP1Q9NQ31 210 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 ZNF221Q9UK13 617 aa17.69■□□□□ 0.42
RAB40B-207ENST00000572603 FBN1P35555 2871 aaKnown RBP17.68■□□□□ 0.42
RAB40B-207ENST00000572603 IGHV3-72A0A0B4J1Y9 119 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 TRIM77I1YAP6 450 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 GPR137BO60478 399 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 SNRNP70P08621 437 aaKnown RBP17.68■□□□□ 0.42
RAB40B-207ENST00000572603 CT45A6P0DMU7 189 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 CT45A5P0DMU8 189 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 CT45A7P0DMV0 189 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 TAS2R19P59542 299 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 Q8N402 240 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 OR4D10Q8NGI6 311 aa17.68■□□□□ 0.42
RAB40B-207ENST00000572603 ANKRD20A5PA0PJZ0 165 aa17.67■□□□□ 0.42
RAB40B-207ENST00000572603 CSF1P09603 554 aa17.67■□□□□ 0.42
RAB40B-207ENST00000572603 EBI3Q14213 229 aa17.67■□□□□ 0.42
RAB40B-207ENST00000572603 RNASE10Q5GAN6 216 aaKnown RBP17.67■□□□□ 0.42
RAB40B-207ENST00000572603 THNSL2Q86YJ6 484 aa17.67■□□□□ 0.42
RAB40B-207ENST00000572603 ZNF645Q8N7E2 425 aa17.67■□□□□ 0.42
RAB40B-207ENST00000572603 ZFAND2BQ8WV99 257 aa17.67■□□□□ 0.42
RAB40B-207ENST00000572603 MOB3AQ96BX8 217 aa17.67■□□□□ 0.42
RAB40B-207ENST00000572603 ZNF2Q9BSG1 426 aaPredicted RBP17.67■□□□□ 0.42
RAB40B-207ENST00000572603 THAP7Q9BT49 309 aaPredicted RBP17.67■□□□□ 0.42
RAB40B-207ENST00000572603 RBM7Q9Y580 266 aaKnown RBP17.67■□□□□ 0.42
RAB40B-207ENST00000572603 M0R1X1 148 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 CD1BP29016 333 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 LINC00205P59089 165 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 FXYD4P59646 89 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 EIF4EBP1Q13541 118 aaPredicted RBP17.66■□□□□ 0.42
RAB40B-207ENST00000572603 KRTAP24-1Q3LI83 254 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 STEAP1BQ6NZ63 245 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 C16orf87Q6PH81 154 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 TMEM219Q86XT9 240 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 Q8N6K4 173 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 ZNF383Q8NA42 475 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 CAPSLQ8WWF8 208 aa17.66■□□□□ 0.42
RAB40B-207ENST00000572603 IGKV1D-33P01593 117 aa17.65■□□□□ 0.42
RAB40B-207ENST00000572603 IGKV1-33P01594 117 aa17.65■□□□□ 0.42
RAB40B-207ENST00000572603 ZNF735P0CB33 412 aa17.65■□□□□ 0.42
RAB40B-207ENST00000572603 KLF9Q13886 244 aaPredicted RBP17.65■□□□□ 0.42
RAB40B-207ENST00000572603 FAAP20Q6NZ36 180 aa17.65■□□□□ 0.42
RAB40B-207ENST00000572603 GLDNQ6ZMI3 551 aaPredicted RBP17.65■□□□□ 0.42
RAB40B-207ENST00000572603 LIAT1Q6ZQX7 453 aa17.65■□□□□ 0.42
RAB40B-207ENST00000572603 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.65■□□□□ 0.42
RAB40B-207ENST00000572603 OR4C16Q8NGL9 310 aa17.65■□□□□ 0.42
RAB40B-207ENST00000572603 SECTM1Q8WVN6 248 aa17.65■□□□□ 0.42
RAB40B-207ENST00000572603 TAS2R8Q9NYW2 309 aa17.65■□□□□ 0.42
RAB40B-207ENST00000572603 FAM181BA6NEQ2 426 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 OR5H14A6NHG9 310 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 H0YJW9 148 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 RAB3DO95716 219 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 HERV-K104P61576 105 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 ZNF45Q02386 682 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 MSMO1Q15800 293 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 AADACL3Q5VUY0 350 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 LHFPL1Q86WI0 220 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 TMEM17Q86X19 198 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 ARRDC1Q8N5I2 433 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 GDPD1Q8N9F7 314 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 DRAXINQ8NBI3 349 aaPredicted RBP17.64■□□□□ 0.41
RAB40B-207ENST00000572603 OR5AN1Q8NGI8 311 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 OR6F1Q8NGZ6 308 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 EAF1Q96JC9 268 aaPredicted RBP17.64■□□□□ 0.41
RAB40B-207ENST00000572603 CCL28Q9NRJ3 127 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 PITPNC1Q9UKF7 332 aa17.64■□□□□ 0.41
RAB40B-207ENST00000572603 SLC22A5O76082 557 aa17.63■□□□□ 0.41
RAB40B-207ENST00000572603 DUTP33316 252 aaKnown RBP17.63■□□□□ 0.41
RAB40B-207ENST00000572603 BAK1Q16611 211 aa17.63■□□□□ 0.41
RAB40B-207ENST00000572603 TAF15Q92804 592 aaKnown RBP eCLIP17.63■□□□□ 0.41
RAB40B-207ENST00000572603 SLC5A7Q9GZV3 580 aa17.63■□□□□ 0.41
RAB40B-207ENST00000572603 LINC00473A8K010 186 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 OR2F2O95006 317 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 FAM106CPP0CH98 169 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 AKAIN1P0CW23 69 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 RPL15P61313 204 aaKnown RBP17.62■□□□□ 0.41
RAB40B-207ENST00000572603 TSPAN5P62079 268 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 RELBQ01201 579 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 MEF2DQ14814 521 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 DDB2Q92466 427 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 MRGPRFQ96AM1 343 aa17.62■□□□□ 0.41
RAB40B-207ENST00000572603 RBM14Q96PK6 669 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms