RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 BTNL8Q6UX41 500 aa9.6□□□□□ -0.87
CCDC40-208ENST00000572270 OR2C3Q8N628 320 aa9.6□□□□□ -0.87
CCDC40-208ENST00000572270 TMEM163Q8TC26 289 aa9.6□□□□□ -0.87
CCDC40-208ENST00000572270 PELI1Q96FA3 418 aa9.6□□□□□ -0.87
CCDC40-208ENST00000572270 SULT4A1Q9BR01 284 aa9.6□□□□□ -0.87
CCDC40-208ENST00000572270 IFI27L2Q9H2X8 130 aa9.6□□□□□ -0.87
CCDC40-208ENST00000572270 PAK1IP1Q9NWT1 392 aaPredicted RBP9.6□□□□□ -0.87
CCDC40-208ENST00000572270 IL36GQ9NZH8 169 aa9.6□□□□□ -0.87
CCDC40-208ENST00000572270 PPP5D1E7EU14 171 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 ST8SIA5O15466 376 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 RBMXL2O75526 392 aaKnown RBP9.59□□□□□ -0.87
CCDC40-208ENST00000572270 APELAP0DMC3 54 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 CCR9P51686 369 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 NANOS3P60323 173 aaKnown RBP9.59□□□□□ -0.87
CCDC40-208ENST00000572270 RIPK1Q13546 671 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 PTGES3Q15185 160 aaKnown RBP9.59□□□□□ -0.87
CCDC40-208ENST00000572270 SPATS1Q496A3 300 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 LY6G6FQ5SQ64 297 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 DMKNQ6E0U4 476 aaPredicted RBP9.59□□□□□ -0.87
CCDC40-208ENST00000572270 ASCL4Q6XD76 172 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 HS3ST5Q8IZT8 346 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 UXS1Q8NBZ7 420 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 ADAD2Q8NCV1 583 aaKnown RBP9.59□□□□□ -0.87
CCDC40-208ENST00000572270 OR5AN1Q8NGI8 311 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 OR11H2Q8NH07 326 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 GALNT14Q96FL9 552 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 JAM3Q9BX67 310 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 MAP6D1Q9H9H5 199 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 AKIP1Q9NQ31 210 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 STEAP1Q9UHE8 339 aa9.59□□□□□ -0.87
CCDC40-208ENST00000572270 MPPED1O15442 326 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 OR2C1O95371 312 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 FAM107AO95990 144 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 HLA-AP01891 365 aaKnown RBP9.58□□□□□ -0.88
CCDC40-208ENST00000572270 SCTP09683 121 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 OR9G9P0C7N8 305 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 RAP2AP10114 183 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 PRKACGP22612 351 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 SSBP2P81877 361 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-208ENST00000572270 FDX2Q6P4F2 183 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 ZNF554Q86TJ5 538 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 CENPSQ8N2Z9 138 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 PARP16Q8N5Y8 322 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 GALMQ96C23 342 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 ASB9Q96DX5 294 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 IL4I1Q96RQ9 567 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 ELAC2Q9BQ52 826 aaKnown RBP9.58□□□□□ -0.88
CCDC40-208ENST00000572270 C6orf62Q9GZU0 229 aaPredicted RBP9.58□□□□□ -0.88
CCDC40-208ENST00000572270 ARL8BQ9NVJ2 186 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 LRP1BQ9NZR2 4599 aa9.58□□□□□ -0.88
CCDC40-208ENST00000572270 TRAV10A0A0B4J240 114 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 ZNF320A2RRD8 509 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 TMEM213A2RRL7 107 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 DEFB4AO15263 64 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 ZNF780AO75290 641 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-208ENST00000572270 CA11O75493 328 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 IGKV1-16P04430 117 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 GTF2F2P13984 249 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 ZNF85Q03923 595 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 FAM106AQ4KMX7 169 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 SLC25A30Q5SVS4 291 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 OR4A47Q6IF82 309 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 RAB12Q6IQ22 244 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 DHFR2Q86XF0 187 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 GPHB5Q86YW7 130 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 OR51A2Q8NGJ7 313 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 DNAJC9Q8WXX5 260 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 FAM46BQ96A09 425 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 SPAG8Q99932 426 aaPredicted RBP9.57□□□□□ -0.88
CCDC40-208ENST00000572270 RNF126Q9BV68 326 aa9.57□□□□□ -0.88
CCDC40-208ENST00000572270 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
CCDC40-208ENST00000572270 A8MWP6 167 aa9.56□□□□□ -0.88
CCDC40-208ENST00000572270 APOA2P02652 100 aa9.56□□□□□ -0.88
CCDC40-208ENST00000572270 RPSAP08865 295 aaKnown RBP9.56□□□□□ -0.88
CCDC40-208ENST00000572270 PJVKQ0ZLH3 352 aa9.56□□□□□ -0.88
CCDC40-208ENST00000572270 PDPNQ86YL7 162 aa9.56□□□□□ -0.88
CCDC40-208ENST00000572270 GAPTQ8N292 157 aa9.56□□□□□ -0.88
CCDC40-208ENST00000572270 OR4A5Q8NH83 315 aa9.56□□□□□ -0.88
CCDC40-208ENST00000572270 CSTL1Q9H114 145 aa9.56□□□□□ -0.88
CCDC40-208ENST00000572270 EXOSC1Q9Y3B2 195 aaKnown RBP9.56□□□□□ -0.88
CCDC40-208ENST00000572270 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
CCDC40-208ENST00000572270 IGLV2-18A0A075B6J9 118 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 OR4C45A6NMZ5 311 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 GPX5O75715 221 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 PRH1P02810 166 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 C15orf32Q32M92 178 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 SLC22A6Q4U2R8 563 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 GLT8D1Q68CQ7 371 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 C5orf24Q7Z6I8 188 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 DEFB107AQ8IZN7 70 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 OR5B3Q8NH48 314 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 IL1F10Q8WWZ1 152 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 MARC2Q969Z3 335 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 ABHD14BQ96IU4 210 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 HRH4Q9H3N8 390 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 ABRACLQ9P1F3 81 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 LRRC42Q9Y546 428 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 PEX16Q9Y5Y5 336 aa9.55□□□□□ -0.88
CCDC40-208ENST00000572270 TRBV9A0A0B4J1U6 114 aa9.54□□□□□ -0.88
CCDC40-208ENST00000572270 A0A1W2PP11 408 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms