RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
RPAIN-209ENST00000571558 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 TBX15Q96SF7 602 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 C1RLQ9NZP8 487 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 POMT1Q9Y6A1 747 aa11.12□□□□□ -0.63
RPAIN-209ENST00000571558 FAM240BA0A1B0GVZ2 78 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 SLC31A2O15432 143 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 RGS11O94810 467 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 IGHV3-7P01780 117 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 OXA1LQ15070 435 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
RPAIN-209ENST00000571558 VMO1Q7Z5L0 202 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 MARCH1Q8TCQ1 289 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 CHPT1Q8WUD6 406 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 EDARADDQ8WWZ3 215 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 SLC25A21Q9BQT8 299 aaPredicted RBP11.11□□□□□ -0.63
RPAIN-209ENST00000571558 IFI27L2Q9H2X8 130 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 DPAGT1Q9H3H5 408 aa11.11□□□□□ -0.63
RPAIN-209ENST00000571558 IGHV2-26A0A0B4J1V2 119 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 TOX4O94842 621 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 IGLV1-47P01700 117 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 IGLV2-14P01704 120 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 TCRBP04435 133 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 OR8U9P0C7N5 309 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 FXYD4P59646 89 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 HERV-K104P61576 105 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 PRB3Q04118 309 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-209ENST00000571558 RBMS2Q15434 407 aaKnown RBP11.1□□□□□ -0.63
RPAIN-209ENST00000571558 SURF2Q15527 256 aaPredicted RBP11.1□□□□□ -0.63
RPAIN-209ENST00000571558 METTL11BQ5VVY1 283 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 REC114Q7Z4M0 266 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 ABHD12Q8N2K0 398 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 LINC00311Q8N616 119 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 OR2AK2Q8NG84 335 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 OR11H6Q8NGC7 330 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 OR8U1Q8NH10 309 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 RSRP1Q9BUV0 290 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 SIRT7Q9NRC8 400 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 ZNRD1Q9P1U0 126 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 COPZ2Q9P299 210 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 VSIG4Q9Y279 399 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 RNF114Q9Y508 228 aa11.1□□□□□ -0.63
RPAIN-209ENST00000571558 A0A1W2PPE3 182 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 RNASEK-C17orf49H0YIS7 233 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 J3QR06 171 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 ST8SIA5O15466 376 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 GNRHRP30968 328 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 ECI1P42126 302 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 GNG10P50151 68 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 LUMP51884 338 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-209ENST00000571558 RELBQ01201 579 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 Q6YL49 198 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 ODF3L1Q8IXM7 274 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 OR13D1Q8NGV5 346 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 OR9G1Q8NH87 305 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 ENKURQ8TC29 256 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 TOMM40LQ969M1 308 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 PCGF1Q9BSM1 259 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 ABHD14AQ9BUJ0 271 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 CLEC7AQ9BXN2 247 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 HEXA-AS1Q9H8Q6 139 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 GPR132Q9UNW8 380 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 TRAV40A0A0B4J280 105 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 ODF3BA8MYP8 253 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 PROP1O75360 226 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 MECP2P51608 486 aaKnown RBP11.09□□□□□ -0.63
RPAIN-209ENST00000571558 KLRD1Q13241 179 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 MSMO1Q15800 293 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 DEFB112Q30KQ8 113 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 NCR3LG1Q68D85 454 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 PNKDQ8N490 385 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 BEND2Q8NDZ0 799 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 SECTM1Q8WVN6 248 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 C5orf30Q96GV9 206 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 RTBDNQ9BSG5 229 aaPredicted RBP11.09□□□□□ -0.63
RPAIN-209ENST00000571558 MARVELD1Q9BSK0 173 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 SLC5A7Q9GZV3 580 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 C20orf85Q9H1P6 137 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 OR2D2Q9H210 308 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 C5orf66Q9H5L9 145 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 CCL28Q9NRJ3 127 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 NUDT15Q9NV35 164 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 RNF150Q9ULK6 438 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 FLVCR2Q9UPI3 526 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 NUBP2Q9Y5Y2 271 aa11.09□□□□□ -0.63
RPAIN-209ENST00000571558 VGLL3A8MV65 326 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 PI3P19957 117 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 COX7A1P24310 79 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 RAB7AP51149 207 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF137PP52743 207 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 EIF4EBP1Q13541 118 aaPredicted RBP11.08□□□□□ -0.64
RPAIN-209ENST00000571558 C2orf68Q2NKX9 166 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 LDLRAD2Q5SZI1 272 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 GPR157Q5UAW9 335 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF626Q68DY1 528 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 LPCAT3Q6P1A2 487 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 CCBE1Q6UXH8 406 aaPredicted RBP11.08□□□□□ -0.64
RPAIN-209ENST00000571558 ZNF818PQ6ZRF7 136 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 SLC38A6Q8IZM9 456 aa11.08□□□□□ -0.64
RPAIN-209ENST00000571558 CENPSQ8N2Z9 138 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms