RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 CXorf66Q5JRM2 361 aaPredicted RBP5.84□□□□□ -1.47
SMG1-215ENST00000568239 TCF23Q7RTU1 214 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 LYG1Q8N1E2 194 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 ZBTB34Q8NCN2 500 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 C5orf30Q96GV9 206 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 YPEL2Q96QA6 119 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 AGMATQ9BSE5 352 aa5.84□□□□□ -1.47
SMG1-215ENST00000568239 RCL1Q9Y2P8 373 aaKnown RBP5.84□□□□□ -1.47
SMG1-215ENST00000568239 A0A1W2PPR1 153 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 C17orf98A8MV24 154 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 M0R1X1 148 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 F2RL2O00254 374 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 SSSCA1O60232 199 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 RPL12P30050 165 aaKnown RBP5.84□□□□□ -1.48
SMG1-215ENST00000568239 CAV2P51636 162 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 ZNF585BQ52M93 769 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 ST8SIA2Q92186 375 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 GPR146Q96CH1 333 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 CITED4Q96RK1 184 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 ABHD14AQ9BUJ0 271 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 NARFLQ9H6Q4 476 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 CTSZQ9UBR2 303 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 ARHGAP32A7KAX9 2087 aa5.84□□□□□ -1.48
SMG1-215ENST00000568239 ZNF729A6NN14 1252 aaPredicted RBP5.83□□□□□ -1.48
SMG1-215ENST00000568239 LINC00473A8K010 186 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 E5RGE8 158 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 PPIHO43447 177 aaKnown RBP5.83□□□□□ -1.48
SMG1-215ENST00000568239 RBMXL2O75526 392 aaKnown RBP5.83□□□□□ -1.48
SMG1-215ENST00000568239 B3GALNT1O75752 331 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 IGKV1-39P01597 117 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 IGKV1D-39P04432 117 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 HKR1P10072 659 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 AGAP20933 346 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 G6PCP35575 357 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 CDKN1AP38936 164 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 VAMP2P63027 116 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 CR1LQ2VPA4 569 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 NMSQ5H8A3 153 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 OR4D5Q8NGN0 318 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 IL22RA2Q969J5 263 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 ZNF714Q96N38 554 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 BBC3Q96PG8 261 aaPredicted RBP5.83□□□□□ -1.48
SMG1-215ENST00000568239 GAL3ST2Q9H3Q3 398 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 ZFP57Q9NU63 452 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 GFOD1Q9NXC2 390 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 IDI2-AS1Q9NZ38 188 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 CACNG5Q9UF02 275 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 NSG2Q9Y328 171 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 LINC00312Q9Y6C7 94 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 TACC2O95359 2948 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 DUXBA0A1W2PPF3 345 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 FCGR3BO75015 233 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 FCN3O75636 299 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 S1PR2O95136 353 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 CGB3P0DN86 165 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 CGB7P0DN87 165 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 PVALBP20472 110 aaPredicted RBP5.83□□□□□ -1.48
SMG1-215ENST00000568239 PPOXP50336 477 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 CT45A1Q5HYN5 189 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 DOPEY1Q5JWR5 2465 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 FAM74A1Q5RGS3 127 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 TMEM200BQ69YZ2 307 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 CT45A3Q8NHU0 189 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 AQP10Q96PS8 301 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 HSD17B10Q99714 261 aaKnown RBP5.83□□□□□ -1.48
SMG1-215ENST00000568239 GSX2Q9BZM3 304 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 TOLLIPQ9H0E2 274 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 ZNRD1Q9P1U0 126 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 POMT1Q9Y6A1 747 aa5.83□□□□□ -1.48
SMG1-215ENST00000568239 PIGBOS1A0A0B4J2F0 54 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 NDUFA2O43678 99 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 IGKV1-5P01602 117 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 LYL1P12980 280 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 DAOP14920 347 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 RAB7AP51149 207 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 TMEM33P57088 247 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 UBA52P62987 128 aaKnown RBP5.82□□□□□ -1.48
SMG1-215ENST00000568239 NCR3LG1Q68D85 454 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 Q6ZRM9 215 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 SSX9Q7RTT3 188 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 IFI27L2Q9H2X8 130 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 NCOR1P1Q9H4R4 102 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 LRRK2Q5S007 2527 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 H3BP45 60 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 CHST1O43916 411 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 PROP1O75360 226 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 DUTP33316 252 aaKnown RBP5.82□□□□□ -1.48
SMG1-215ENST00000568239 MEF2CQ06413 473 aaPredicted RBP5.82□□□□□ -1.48
SMG1-215ENST00000568239 ZNF66Q6ZN08 573 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 RBMXL1Q96E39 390 aaKnown RBP5.82□□□□□ -1.48
SMG1-215ENST00000568239 ITGB1BP2Q9UKP3 347 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 SAA2-SAA4A0A096LPE2 208 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 A0A1B0GU03 582 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 FAM24AA6NFZ4 105 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 TEX46H3BTG2 121 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 RAB29O14966 203 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 NDUFS7O75251 213 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 DANCRP0C864 163 aa5.82□□□□□ -1.48
SMG1-215ENST00000568239 SAA2P0DJI9 122 aaPredicted RBP5.82□□□□□ -1.48
SMG1-215ENST00000568239 MRPS11P82912 194 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms