RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZNF391Q9UJN7 358 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 FBXL3Q9UKT7 428 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 COPS3Q9UNS2 423 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 FOXJ3Q9UPW0 622 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 MGAT4BQ9UQ53 548 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 SLC22A13Q9Y226 551 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 SIGLEC7Q9Y286 467 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 FAM32AQ9Y421 112 aaKnown RBP0.82□□□□□ -2.28
SMG1-212ENST00000566328 TIMM10BQ9Y5J6 103 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 NPTNQ9Y639 398 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 GMEB1Q9Y692 573 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 DNAH6Q9C0G6 4158 aa0.82□□□□□ -2.28
SMG1-212ENST00000566328 TNCP24821 2201 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 TENM2Q9NT68 2774 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 DSCAML1Q8TD84 2053 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 DYNC1H1Q14204 4646 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 PKHD1P08F94 4074 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 IGKV1-27A0A075B6S5 117 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 IGLV1-36A0A0B4J1U3 117 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 ZNF816-ZNF321PA0A0X1KG74 233 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 A0A1B0GTI1 187 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 TMEM269A0A1B0GVZ9 245 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 FAM230AA0A1W2PPH8 454 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 A0A1W2PQL4 384 aaPredicted RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 DHRS12A0PJE2 317 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 TMEM89A2RUT3 159 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 GGT3PA6NGU5 568 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 FBLL1A6NHQ2 334 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 RFPL4AA6NLU0 287 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CD300LBA8K4G0 201 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CEACAM18A8MTB9 384 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 C12orf71A8MTZ7 269 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 B4DSR2 109 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CLDN25C9JDP6 229 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 RFPL4AL1F8VTS6 287 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 G3V4G9 280 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 RNASEK-C17orf49H0YIS7 233 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 H3BN98 237 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 BHLHE40O14503 412 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 XKRYO14609 159 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 GNGT2O14610 69 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 SGCEO43556 437 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 TCF21O43680 179 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 SYNGR1O43759 233 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 ANGPTL7O43827 346 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 GMDSO60547 372 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CCDC22O60826 627 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CCNB2O95067 398 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 UBL3O95164 117 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 NDUFB2O95178 105 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 GADD45GO95257 159 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 FARS2O95363 451 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 PTBP3O95758 552 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 CLIC3O95833 236 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 MT-ATP6P00846 226 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CST1P01037 141 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 LHBP01229 141 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 IFNA14P01570 189 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 FABP3P05413 133 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CST2P09228 141 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 ACSM4P0C7M7 580 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CD28P10747 220 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 PIPP12273 146 aaPredicted RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 SLC25A16P16260 332 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CCL3L1P16619 93 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 SPI1P17947 270 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 MSR1P21757 451 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 PPIBP23284 216 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 PRTN3P24158 256 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 FMO3P31513 532 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 PRDX2P32119 198 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 RBM34P42696 430 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 GUCA1AP43080 201 aaPredicted RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 NPBWR2P48146 333 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CX3CR1P49238 355 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 MRPL19P49406 292 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 DAP3P51398 398 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 CNN1P51911 297 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 GTF2A1P52655 376 aaPredicted RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 OR12D2P58182 307 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 ZNF121P58317 390 aaPredicted RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 RND3P61587 244 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 ESRRGP62508 458 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 UBA52P62987 128 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 ACTG1P63261 375 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 HIST1H3AP68431 136 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 CBX1P83916 185 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 FAM3AP98173 230 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 ST3GAL3Q11203 375 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 KRR1Q13601 381 aaKnown RBP0.81□□□□□ -2.28
SMG1-212ENST00000566328 APOFQ13790 326 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 DGCR6Q14129 220 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 DIAPH2-AS1Q14236 149 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 INSL4Q14641 139 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 OR8G1Q15617 311 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 UBE2V2Q15819 145 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 TAF9Q16594 264 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 DGUOKQ16854 277 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 LTC4SQ16873 150 aa0.81□□□□□ -2.28
SMG1-212ENST00000566328 TBC1D28Q2M2D7 210 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms