RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 HDHD3Q9BSH5 251 aaPredicted RBP12.43□□□□□ -0.42
RNF40-205ENST00000563909 SLIRPQ9GZT3 109 aaKnown RBP12.43□□□□□ -0.42
RNF40-205ENST00000563909 TAF9BQ9HBM6 251 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 Q9N2K0 584 aa12.43□□□□□ -0.42
RNF40-205ENST00000563909 HECTD4Q9Y4D8 3996 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 A0A087X0M5 115 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 A0A1B0GX30 115 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 TMEM235A6NFC5 223 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 RGS5O15539 181 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 HBZP02008 142 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 ELK1P19419 428 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 NFYBP25208 207 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 CD34P28906 385 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 GDNFP39905 211 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 HMGN3Q15651 99 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 LTC4SQ16873 150 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 KIAA2026Q5HYC2 2103 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 ABHD12Q8N2K0 398 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 PRR18Q8N4B5 295 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 OR52M1Q8NGK5 317 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 MCFD2Q8NI22 146 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 DCUN1D5Q9BTE7 237 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 AUNIPQ9H7T9 357 aa12.42□□□□□ -0.42
RNF40-205ENST00000563909 LEUTXA8MZ59 168 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 SDCBPO00560 298 aaPredicted RBP12.41□□□□□ -0.42
RNF40-205ENST00000563909 CTDSP2O14595 271 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 RPLP1P05386 114 aaKnown RBP12.41□□□□□ -0.42
RNF40-205ENST00000563909 FCGR3AP08637 254 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 DTYMKP23919 212 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 INSL3P51460 131 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 TAS2R20P59543 309 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 SRSF7Q16629 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
RNF40-205ENST00000563909 IZUMO1Q8IYV9 350 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 ZNF596Q8TC21 504 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 GALMQ96C23 342 aa12.41□□□□□ -0.42
RNF40-205ENST00000563909 C6orf62Q9GZU0 229 aaPredicted RBP12.41□□□□□ -0.42
RNF40-205ENST00000563909 NXF2Q9GZY0 626 aaKnown RBP12.41□□□□□ -0.42
RNF40-205ENST00000563909 ELF5Q9UKW6 265 aaPredicted RBP12.41□□□□□ -0.42
RNF40-205ENST00000563909 TRDCB7Z8K6 153 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 TOR1AO14656 332 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 SLC25A17O43808 307 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 PRRX1P54821 245 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 HLA-DRB3P79483 266 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 HTD2P86397 168 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 Q3ZCU0 254 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 TEX38Q6PEX7 206 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 BAIAP2L2Q6UXY1 529 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 OR9G1Q8NH87 305 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 UBALD1Q8TB05 177 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 BATF3Q9NR55 127 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 GFOD1Q9NXC2 390 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 EXTL2Q9UBQ6 330 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 MOB4Q9Y3A3 225 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 A3GALT2U3KPV4 340 aa12.4□□□□□ -0.42
RNF40-205ENST00000563909 A6NHS1 94 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 TPPPO94811 219 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 CBX5P45973 191 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 STEAP3Q658P3 488 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 Q6ZS49 121 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 C15orf40Q8WUR7 153 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 NUDCD2Q8WVJ2 157 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 MIXL1Q9H2W2 232 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 ZNF286AQ9HBT8 521 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 OR2S2Q9NQN1 319 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 GNG12Q9UBI6 72 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 JPT1Q9UK76 154 aa12.39□□□□□ -0.43
RNF40-205ENST00000563909 MRPS7Q9Y2R9 242 aaKnown RBP12.39□□□□□ -0.43
RNF40-205ENST00000563909 IGHV3-43A0A0B4J1X8 118 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 FAM172BPA6NC97 362 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 SSX5O60225 188 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 RGS11O94810 467 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 HLA-DQB1P01920 261 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 SCTP09683 121 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 IGHV3-43DP0DP04 118 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 SPNP16150 400 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 PRSS3P35030 304 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 CEACAM3P40198 252 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 CDX1P47902 265 aaPredicted RBP12.38□□□□□ -0.43
RNF40-205ENST00000563909 LAX1Q8IWV1 398 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 DRAM1Q8N682 238 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 OR4A4PQ8NGN8 299 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 IL17DQ8TAD2 202 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 IL1F10Q8WWZ1 152 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 CREB3L1Q96BA8 519 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 ST6GALNAC5Q9BVH7 336 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 RABL2AQ9UBK7 228 aaPredicted RBP12.38□□□□□ -0.43
RNF40-205ENST00000563909 ZNF230Q9UIE0 474 aaPredicted RBP12.38□□□□□ -0.43
RNF40-205ENST00000563909 RABL2BQ9UNT1 228 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 PSG11Q9UQ72 335 aa12.38□□□□□ -0.43
RNF40-205ENST00000563909 J3QR06 171 aa12.37□□□□□ -0.43
RNF40-205ENST00000563909 FABP7O15540 132 aa12.37□□□□□ -0.43
RNF40-205ENST00000563909 YPEL1O60688 119 aa12.37□□□□□ -0.43
RNF40-205ENST00000563909 FAM106CPP0CH98 169 aa12.37□□□□□ -0.43
RNF40-205ENST00000563909 GP9P14770 177 aa12.37□□□□□ -0.43
RNF40-205ENST00000563909 S100A5P33763 92 aa12.37□□□□□ -0.43
RNF40-205ENST00000563909 MORN2Q502X0 79 aa12.37□□□□□ -0.43
RNF40-205ENST00000563909 LY6G6FQ5SQ64 297 aa12.37□□□□□ -0.43
RNF40-205ENST00000563909 TPTE2P1Q5T6R2 138 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms