RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 FAM234AQ9H0X4 552 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 KCNIP1Q9NZI2 227 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 GTF3C1Q12789 2109 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 A8MWP6 167 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 DNPH1O43598 174 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 IGKV1-5P01602 117 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 Q8NFD4 153 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 OR5A2Q8NGI9 324 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 NINJ1Q92982 152 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 WDR61Q9GZS3 305 aaKnown RBP10.03□□□□□ -0.8
ABCA3-203ENST00000563623 PARLQ9H300 379 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 BOKQ9UMX3 212 aaPredicted RBP10.03□□□□□ -0.8
ABCA3-203ENST00000563623 PRR14LQ5THK1 2151 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 C20orf202A1L168 122 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A10PA6NDY2 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A18PA6NE21 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A16PA6NEW6 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A20PA6NIJ5 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A8PA6NJQ4 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A7PA6NKC0 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A22PA8MWA6 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A12PA8MX19 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A5PA8MXJ8 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A23PA8MXZ1 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 AMBPP02760 352 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A15PP0C7V4 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A13PP0C7W8 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A14PP0C7W9 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM90A24PP0C7X0 464 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 LRRC75BQ2VPJ9 315 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FGFRL1Q8N441 504 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 C11orf42Q8N5U0 333 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 FAM122AQ96E09 287 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 GPR179Q6PRD1 2367 aa10.03□□□□□ -0.8
ABCA3-203ENST00000563623 LY6G6EA0A0G2JKS1 128 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 ZNF320A2RRD8 509 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 PDGFBP01127 241 aaPredicted RBP10.02□□□□□ -0.8
ABCA3-203ENST00000563623 IGKV1-39P01597 117 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 IGKV1D-39P04432 117 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 SERF2P84101 59 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 DAZAP2Q15038 168 aaPredicted RBP10.02□□□□□ -0.8
ABCA3-203ENST00000563623 ABHD17BQ5VST6 288 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 FAM78BQ5VT40 261 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 HAPLN4Q86UW8 402 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 TMEM183AQ8IXX5 376 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 RPP25LQ8N5L8 163 aaKnown RBP10.02□□□□□ -0.8
ABCA3-203ENST00000563623 OR10P1Q8NGE3 313 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 OR2T10Q8NGZ9 312 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 RFESDQ8TAC1 157 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 IL22RA2Q969J5 263 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 CTDSP1Q9GZU7 261 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 U3KQA8 63 aa10.02□□□□□ -0.8
ABCA3-203ENST00000563623 KIAA1324LA8MWY0 1029 aaPredicted RBP10.02□□□□□ -0.81
ABCA3-203ENST00000563623 MSMO1Q15800 293 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 SMIM15Q7Z3B0 74 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 TMEM204Q9BSN7 226 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 PARD6GQ9BYG4 376 aaPredicted RBP10.02□□□□□ -0.81
ABCA3-203ENST00000563623 SRD5A3Q9H8P0 318 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 DNAJC4Q9NNZ3 241 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 SIT1Q9Y3P8 196 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 IGHV3-43A0A0B4J1X8 118 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 DEFB108AA8MXU0 73 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 CDIPTO14735 213 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 GYPAP02724 150 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 IGHV3-43DP0DP04 118 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 ACTR3CQ9C0K3 210 aaPredicted RBP10.02□□□□□ -0.81
ABCA3-203ENST00000563623 OR2D2Q9H210 308 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 PARD6AQ9NPB6 346 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 MED12LQ86YW9 2145 aa10.02□□□□□ -0.81
ABCA3-203ENST00000563623 ZNF503-AS2A6NEH8 195 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 TFPI2P48307 235 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 RPL23P62829 140 aaKnown RBP10.01□□□□□ -0.81
ABCA3-203ENST00000563623 FAM53AQ6NSI3 398 aaPredicted RBP10.01□□□□□ -0.81
ABCA3-203ENST00000563623 DRAM1Q8N682 238 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 B4GALT7Q9UBV7 327 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 CNOT1A5YKK6 2376 aaKnown RBP10.01□□□□□ -0.81
ABCA3-203ENST00000563623 RIF1Q5UIP0 2472 aaKnown RBP10.01□□□□□ -0.81
ABCA3-203ENST00000563623 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 PIGBOS1A0A0B4J2F0 54 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 A0A1W2PPV4 95 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 EDDM3BP56851 147 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 C1orf185Q5T7R7 199 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 ABLIM2Q6H8Q1 611 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 ACSM6Q6P461 480 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 MBD3L1Q8WWY6 194 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 TMEM18Q96B42 140 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 SH3BGRL2Q9UJC5 107 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 PRRC2CQ9Y520 2896 aaKnown RBP10.01□□□□□ -0.81
ABCA3-203ENST00000563623 TRBV24-1A0A075B6N3 115 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 KBTBD11O94819 623 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 IGKV1D-33P01593 117 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 IGKV1-33P01594 117 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 COX5AP20674 150 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 CD82P27701 267 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 MAGEA5P43359 124 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 CD81P60033 236 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 TFF3Q07654 80 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 TPRX1Q8N7U7 411 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 SPSB4Q96A44 273 aa10.01□□□□□ -0.81
ABCA3-203ENST00000563623 P2RX4Q99571 388 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms