RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 S1PR2O95136 353 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 KRASP01116 189 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 G6PCP35575 357 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 EDDM3BP56851 147 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 TNFRSF9Q07011 255 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 AKR1C8PQ5T2L2 129 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 ZNRF1Q8ND25 227 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 SCGB1C1Q8TD33 95 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 SNRNP40Q96DI7 357 aaKnown RBP17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 MSRB2Q9Y3D2 182 aa17.76■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 PRR14LQ5THK1 2151 aa17.75■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 A0A1B0GW64 132 aa17.75■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 FAM234AQ9H0X4 552 aa17.75■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 LOC400499M0QZD8 3231 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 LRRC30A6NM36 301 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 VSTM5A8MXK1 200 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 FAM157AC9JC47 383 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 ITGB1BP1O14713 200 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 LTC4SQ16873 150 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 STUMQ69YW2 141 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 H2BFWTQ7Z2G1 175 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 EIF5A2Q9GZV4 153 aaKnown RBP17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 RBKSQ9H477 322 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 SMDT1Q9H4I9 107 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 CALYQ9NYX4 217 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 SH3BGRL2Q9UJC5 107 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 LOC105371267A0A1B0GV96 52 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 NUPL2O15504 423 aaKnown RBP17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 TNFRSF1AP19438 455 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 PARD6GQ9BYG4 376 aaPredicted RBP17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 ZNF665Q9H7R5 613 aa17.74■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 CEP250Q9BV73 2442 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 KIAA2026Q5HYC2 2103 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 DPRXA6NFQ7 191 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 FAM74A7A6NL05 159 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 CD55P08174 381 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 OR8U8P0C7N1 319 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 METTL15P1P0C7V9 234 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 RAB7AP51149 207 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 TMPRSS3P57727 454 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 BRWD1-AS2P59051 145 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 RAB2AP61019 212 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 TLE4Q04727 773 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 FAM74A3Q4VXF1 159 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 SPANXN5Q5MJ07 72 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 NGBQ9NPG2 151 aa17.73■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 PRRC2CQ9Y520 2896 aaKnown RBP17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 LOXL3P58215 753 aa17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 TMEM30BQ3MIR4 351 aa17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 LILRB2Q8N423 598 aa17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 ZNF525Q8N782 197 aa17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 RND1Q92730 232 aa17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 CIB3Q96Q77 187 aaPredicted RBP17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 SCRT1Q9BWW7 348 aa17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 GAB2Q9UQC2 676 aa17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 ZFHX4Q86UP3 3567 aa17.72■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 TRGV10A0A0A0MS01 117 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 LINC00473A8K010 186 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 C9JQL5 133 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 CYB5R3P00387 301 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 HBE1P02100 147 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 THBDP07204 575 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 H2AFB1P0C5Y9 115 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 CGB3P0DN86 165 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 CGB7P0DN87 165 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 ATF4P18848 351 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 DUTP33316 252 aaKnown RBP17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 KIR2DS2P43631 304 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 UCNP55089 124 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 RUNX1Q01196 453 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 BSPH1Q075Z2 132 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 THNSL2Q86YJ6 484 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 PSMG3Q9BT73 122 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 HIPK2Q9H2X6 1198 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 MEX3AA1L020 520 aaKnown RBP17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 FAM90A9PA6NNJ1 464 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 LY86O95711 162 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 OR4A8P0C604 315 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 PPT1P50897 306 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 ADIPOQQ15848 244 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 FAM201AQ5SY85 155 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 TEX36Q5VZQ5 186 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 DHRS7BQ6IAN0 325 aaPredicted RBP17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 TMEM14EPQ6UXP3 125 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 GAFA1Q96PS6 74 aa17.71■□□□□ 0.43
VPS9D1-AS1-202ENST00000562866 FRYQ5TBA9 3013 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 KBTBD11-OT1A0A1B0GTJ5 212 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 C17orf100A8MU93 164 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 RBFOX2O43251 390 aaKnown RBP eCLIP17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 HPRT1P00492 218 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 ZNF788Q6ZQV5 615 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 HAPLN4Q86UW8 402 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 CLRN3Q8NCR9 226 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 CLN8Q9UBY8 286 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 RFNGQ9Y644 331 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 AKAP13Q12802 2813 aa17.7■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 NKX6-3A6NJ46 265 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 M0R1X1 148 aa17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 SCAF4O95104 1147 aaKnown RBP17.69■□□□□ 0.42
VPS9D1-AS1-202ENST00000562866 NPBWR1P48145 328 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms