RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 GNB2P62879 340 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 CX3CL1P78423 397 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 GPR176Q14439 515 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 SPCS2Q15005 226 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 C17orf58Q2M2W7 97 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 LRRC10Q5BKY1 277 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 UTF1Q5T230 341 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 HES5Q5TA89 166 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 GPR107Q5VW38 600 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 GPR141Q7Z602 305 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 KIR3DL3Q8N743 410 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 SUMF2Q8NBJ7 301 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 TMEM185AQ8NFB2 350 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 OR5H6Q8NGV6 325 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 KCNG3Q8TAE7 436 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 NDNFQ8TB73 568 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 DYRK2Q92630 601 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 CORO2AQ92828 525 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 FAM46BQ96A09 425 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 UPRTQ96BW1 309 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 BCL7BQ9BQE9 202 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 TMEM59Q9BXS4 323 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 FAM192AQ9GZU8 254 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 CHST6Q9GZX3 395 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 PPA2Q9H2U2 334 aa4.81□□□□□ -1.64
LRRC28-220ENST00000561253 A0A0G2JMP0 313 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 A0A0X1KG70 313 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 ODAMA1E959 279 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 FAM172BPA6NC97 362 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 C17orf98A8MV24 154 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 H3BMQ9 156 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 M0R1W7 72 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 BMPR1BO00238 502 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 MFNGO00587 321 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 SH2D1BO14796 132 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 DEGS1O15121 323 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 SOCS1O15524 211 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 CRTAPO75718 401 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-220ENST00000561253 MMP23AO75900 390 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 OR7C1O76099 320 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-220ENST00000561253 NAPSAO96009 420 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF44P15621 663 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 FUT3P21217 361 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 GLIPR1P48060 266 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 KCNJ3P48549 501 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 TMBIM6P55061 237 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 DLX1P56177 255 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 RPL31P62899 125 aaKnown RBP4.8□□□□□ -1.64
LRRC28-220ENST00000561253 MXD1Q05195 221 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 MEF2CQ06413 473 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-220ENST00000561253 GRK1Q15835 563 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 MOGAT2Q3SYC2 334 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 FAM120AOSQ5T036 256 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF880Q6PDB4 577 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF497Q6ZNH5 498 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 Q71RC1 249 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-220ENST00000561253 BPIFB2Q8N4F0 458 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 TPRX1Q8N7U7 411 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 ASCC1Q8N9N2 400 aaKnown RBP4.8□□□□□ -1.64
LRRC28-220ENST00000561253 OR4M2Q8NGB6 313 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 LGALS14Q8TCE9 139 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 DYNC2LI1Q8TCX1 351 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 CCDC107Q8WV48 283 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 SSMEM1Q8WWF3 244 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 ISOC1Q96CN7 298 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 SULT4A1Q9BR01 284 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 SELENOIQ9C0D9 397 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 CST11Q9H112 138 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 PLGRKTQ9HBL7 147 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 DAPK2Q9UIK4 370 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 KPTNQ9Y664 436 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 LINC00312Q9Y6C7 94 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 VWFP04275 2813 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 CMYA5Q8N3K9 4069 aa4.8□□□□□ -1.64
LRRC28-220ENST00000561253 TRBV6-6A0A0A6YYG2 114 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 MEX3AA1L020 520 aaKnown RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 RNASEK-C17orf49H0YIS7 233 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 C15orf65H3BRN8 121 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF701M0R085 212 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 CRLF1O75462 422 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 RBP4P02753 201 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 MT-ND4P03905 459 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 ZNF728P0DKX0 622 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 IGHV4-38-2P0DP08 117 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 CCL3L1P16619 93 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 GABRR1P24046 479 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 PRTN3P24158 256 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 SERPINB10P48595 397 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 ARF6P62330 175 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 AESQ08117 197 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 DYNC1I2Q13409 638 aaKnown RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 ATXN7L3Q14CW9 347 aaPredicted RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 PAN3Q58A45 887 aaKnown RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 LDLRAD2Q5SZI1 272 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 OLFML2AQ68BL7 652 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 SLC35E4Q6ICL7 350 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 RAB12Q6IQ22 244 aa4.79□□□□□ -1.64
LRRC28-220ENST00000561253 FIP1L1Q6UN15 594 aaKnown RBP4.79□□□□□ -1.64
LRRC28-220ENST00000561253 BAIAP2L2Q6UXY1 529 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms