RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	BPNT1	O95861	308 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	OR8U9	P0C7N5	309 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	SNRPB	P14678	240 aa	Known RBP	10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	ZBTB25	P24278	435 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	TMEM50B	P56557	158 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	UNQ5815/PRO19632	Q6UWF5	114 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	MOB1B	Q7L9L4	216 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	OVCH2	Q7RTZ1	564 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	CEACAM19	Q7Z692	300 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	LFNG	Q8NES3	379 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	OR6Q1	Q8NGQ2	317 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	EDARADD	Q8WWZ3	215 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	MGAT4A	Q9UM21	535 aa		10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	LSM2	Q9Y333	95 aa	Known RBP	10.49	□□□□□ -0.73
RNF31-223	ENST00000560754	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	TRIM64C	A6NLI5	447 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754		A8MZ25	164 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754		H7C2Y5	167 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	SOCS1	O15524	211 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	TFAP2A	P05549	437 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	CDK1	P06493	297 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	SCT	P09683	121 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	UCHL1	P09936	223 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	GABPB1	Q06547	395 aa	Predicted RBP	10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	PLGLA	Q15195	96 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	SPHAR	Q15513	63 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	ARPC1A	Q92747	370 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	MS4A10	Q96PG2	267 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	OR4C12	Q96R67	309 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	FAM103A1	Q9BTL3	118 aa	Known RBP	10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	MND1	Q9BWT6	205 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754		Q9N2K0	584 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	METTL1	Q9UBP6	276 aa	Known RBP	10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	AK3	Q9UIJ7	227 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	A3GALT2	U3KPV4	340 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	CSMD3	Q7Z407	3707 aa		10.48	□□□□□ -0.73
RNF31-223	ENST00000560754	CASQ2	O14958	399 aa	Predicted RBP	10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	BRI3	O95415	125 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	IGLV1-51	P01701	117 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	IGHV3-11	P01762	117 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	IGKV1-16	P04430	117 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	CD40LG	P29965	261 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	LINC00205	P59089	165 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	HSD17B12	Q53GQ0	312 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	RBM48	Q5RL73	367 aa	Known RBP	10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	OGFRL1	Q5TC84	451 aa	Predicted RBP	10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	ZNF383	Q8NA42	475 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	DRAXIN	Q8NBI3	349 aa	Predicted RBP	10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	OR6M1	Q8NGM8	313 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	CITED4	Q96RK1	184 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	CLCC1	Q96S66	551 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	TSNAX	Q99598	290 aa	Known RBP	10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	GFI1	Q99684	422 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	TM2D3	Q9BRN9	247 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	TMED9	Q9BVK6	235 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	KCNK15	Q9H427	330 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	CHMP1A	Q9HD42	196 aa	Predicted RBP	10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	RANGRF	Q9HD47	186 aa	Predicted RBP	10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	C19orf73	Q9NVV2	129 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	OR1A1	Q9P1Q5	309 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	DNAH7	Q8WXX0	4024 aa		10.47	□□□□□ -0.73
RNF31-223	ENST00000560754	IGKV1-6	A0A0C4DH72	117 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	PTGES3L	E9PB15	166 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	SPDEF	O95238	335 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	CRYGB	P07316	175 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	TPPP2	P59282	170 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	SSBP2	P81877	361 aa	Predicted RBP	10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	PITPNA	Q00169	270 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	KLF5	Q13887	457 aa	Predicted RBP	10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	TMEM91	Q6ZNR0	172 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	SETD6	Q8TBK2	473 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	URM1	Q9BTM9	101 aa	Known RBP	10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	ELOVL1	Q9BW60	279 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754	ZMAT4	Q9H898	229 aa		10.46	□□□□□ -0.73
RNF31-223	ENST00000560754		H3BUA1	57 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	SLC17A2	O00624	439 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	HSPA12A	O43301	675 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	CA2	P00918	260 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	IGLV2-23	P01705	113 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	TRGV3	P03979	118 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	LYL1	P12980	280 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	ARSB	P15848	533 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	CPE	P16870	476 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	LGALS7	P47929	136 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	RPS16	P62249	146 aa	Known RBP	10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	HLA-DRB3	P79483	266 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	TPBG	Q13641	420 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	IRF3	Q14653	427 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	FXYD3	Q14802	87 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	IL34	Q6ZMJ4	242 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	PDPN	Q86YL7	162 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	ABHD5	Q8WTS1	349 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	TMEM68	Q96MH6	324 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	ZNF221	Q9UK13	617 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754	STUB1	Q9UNE7	303 aa		10.45	□□□□□ -0.74
RNF31-223	ENST00000560754		A0A0G2JLM5	398 aa		10.44	□□□□□ -0.74
RNF31-223	ENST00000560754	TRDC	B7Z8K6	153 aa		10.44	□□□□□ -0.74
RNF31-223	ENST00000560754	LDLRAD4	O15165	306 aa		10.44	□□□□□ -0.74
RNF31-223	ENST00000560754	IGHV4-30-4	P0DP06	118 aa		10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms