RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 CTRB1P17538 263 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 OMGP23515 440 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 GLIPR1P48060 266 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 NPBWR1P48145 328 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 CEBPDP49716 269 aaPredicted RBP8.09□□□□□ -1.11
RTF1-206ENST00000560447 TDGF1P3P51864 188 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 HFEQ30201 348 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 PDLIM3Q53GG5 364 aaPredicted RBP8.09□□□□□ -1.11
RTF1-206ENST00000560447 KHDC3LQ587J8 217 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 ZNF506Q5JVG8 444 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 CTRB2Q6GPI1 263 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 SPSB3Q6PJ21 355 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 TMEM108Q6UXF1 575 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 C1orf229Q6ZS94 237 aaPredicted RBP8.09□□□□□ -1.11
RTF1-206ENST00000560447 LILRB2Q8N423 598 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 OR10A7Q8NGE5 316 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 OR52E5Q8NH55 327 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 MRGPRDQ8TDS7 321 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 TCTEX1D2Q8WW35 142 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 ADTRPQ96IZ2 230 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 OR2V2Q96R30 315 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 GPHA2Q96T91 129 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 AIFM2Q9BRQ8 373 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 AGMATQ9BSE5 352 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 PARP12Q9H0J9 701 aaKnown RBP8.09□□□□□ -1.11
RTF1-206ENST00000560447 LINC00574Q9H8X3 128 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 ZNF835Q9Y2P0 537 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 TANC2Q9HCD6 1990 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 KIAA2026Q5HYC2 2103 aa8.09□□□□□ -1.11
RTF1-206ENST00000560447 DSCAML1Q8TD84 2053 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 VSTM5A8MXK1 200 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 AGPAT2O15120 278 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 HPRT1P00492 218 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 EGR1P18146 543 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 CD40P25942 277 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 PPP1CCP36873 323 aaKnown RBP8.08□□□□□ -1.12
RTF1-206ENST00000560447 GPR12P47775 334 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 PPT1P50897 306 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 RPL30P62888 115 aaKnown RBP8.08□□□□□ -1.12
RTF1-206ENST00000560447 RPP30P78346 268 aaKnown RBP8.08□□□□□ -1.12
RTF1-206ENST00000560447 RNF212Q495C1 297 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 MORN2Q502X0 79 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 TEX36Q5VZQ5 186 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 H2BFWTQ7Z2G1 175 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 TMEM217Q8N7C4 229 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 CORO2AQ92828 525 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 P2RX4Q99571 388 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 TMEM147Q9BVK8 224 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 EGLN1Q9GZT9 426 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 RBKSQ9H477 322 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 JKAMPQ9P055 326 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 DUSP13Q9UII6 198 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 FZR1Q9UM11 496 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 PRELID3BQ9Y3B1 194 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 MUC3AQ02505 3323 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 TTC28Q96AY4 2481 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 WDFY4Q6ZS81 3184 aa8.08□□□□□ -1.12
RTF1-206ENST00000560447 CUL9Q8IWT3 2517 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 ARID1AO14497 2285 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 ZNF729A6NN14 1252 aaPredicted RBP8.07□□□□□ -1.12
RTF1-206ENST00000560447 C9JQL5 133 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 C16orf97H3BN30 126 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 S1PR2O95136 353 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 IFNA1P01562 189 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 TNFRSF1AP19438 455 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 SPINK2P20155 84 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 DUTP33316 252 aaKnown RBP8.07□□□□□ -1.12
RTF1-206ENST00000560447 SSTR5P35346 364 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 ID4P47928 161 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 GNB2P62879 340 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 TNFAIP6P98066 277 aaPredicted RBP8.07□□□□□ -1.12
RTF1-206ENST00000560447 RBPJQ06330 500 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 SLC38A11Q08AI6 406 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 MSMPQ1L6U9 139 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 VWC2Q2TAL6 325 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 Q3ZCU0 254 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 SOHLH1Q5JUK2 328 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 STUMQ69YW2 141 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 MOGAT3Q86VF5 341 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 LRP11Q86VZ4 500 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 THNSL2Q86YJ6 484 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 ITLN1Q8WWA0 313 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 TAF15Q92804 592 aaKnown RBP eCLIP8.07□□□□□ -1.12
RTF1-206ENST00000560447 C5orf30Q96GV9 206 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 CLCC1Q96S66 551 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 WDR61Q9GZS3 305 aaKnown RBP8.07□□□□□ -1.12
RTF1-206ENST00000560447 ZNF665Q9H7R5 613 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 NGBQ9NPG2 151 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 CALYQ9NYX4 217 aa8.07□□□□□ -1.12
RTF1-206ENST00000560447 TRGV10A0A0A0MS01 117 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 C17orf98A8MV24 154 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 ATP6V1G2-DDX39BF2Z307 99 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 SIGLEC5O15389 551 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 NUPL2O15504 423 aaKnown RBP8.06□□□□□ -1.12
RTF1-206ENST00000560447 ZG16O60844 167 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 MPDU1O75352 247 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 C1QL1O75973 258 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 METTL15P1P0C7V9 234 aa8.06□□□□□ -1.12
RTF1-206ENST00000560447 IAPPP10997 89 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms