RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ZNF431Q8TF32 576 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-214ENST00000560402 R3HDM4Q96D70 268 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 AKR1E2Q96JD6 320 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 HYLS1Q96M11 299 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 CLEC7AQ9BXN2 247 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 TMEM133Q9H2Q1 129 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 RIMS4Q9H426 269 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-214ENST00000560402 ZNF286AQ9HBT8 521 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 NECAP2Q9NVZ3 263 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 MGAT4CQ9UBM8 478 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 GLS2Q9UI32 602 aa10.9□□□□□ -0.66
SMAD3-214ENST00000560402 ELF5Q9UKW6 265 aaPredicted RBP10.9□□□□□ -0.66
SMAD3-214ENST00000560402 PAIP2BQ9ULR5 123 aaKnown RBP10.9□□□□□ -0.66
SMAD3-214ENST00000560402 NOTCH3Q9UM47 2321 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 IGKV1-12A0A0C4DH73 117 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 MGST3O14880 152 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 GEMIN2O14893 280 aaKnown RBP10.89□□□□□ -0.67
SMAD3-214ENST00000560402 IGKV1D-12P01611 117 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 PMP2P02689 132 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 GLAP06280 429 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 ZNF735P0CB33 412 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 GSTT2P0CG29 244 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 CD28P10747 220 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 C4BPBP20851 252 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 GLP1RP43220 463 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 RBM39Q14498 530 aaKnown RBP10.89□□□□□ -0.67
SMAD3-214ENST00000560402 HABP2Q14520 560 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-214ENST00000560402 SURF2Q15527 256 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-214ENST00000560402 PIGYQ3MUY2 71 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 LDLRAD2Q5SZI1 272 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 LIN54Q6MZP7 749 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 Q6ZPA2 131 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 TERB2Q8NHR7 220 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 ZNF486Q96H40 463 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-214ENST00000560402 SEC22CQ9BRL7 303 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 ZNF436Q9C0F3 470 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-214ENST00000560402 GAL3ST2Q9H3Q3 398 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 CHMP1AQ9HD42 196 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-214ENST00000560402 EHFQ9NZC4 300 aa10.89□□□□□ -0.67
SMAD3-214ENST00000560402 UBE2J1Q9Y385 318 aaPredicted RBP10.89□□□□□ -0.67
SMAD3-214ENST00000560402 ADARB2-AS1A8MUL3 147 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 MCRIP1C9JLW8 97 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 F8VVB4 439 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 F8VWA3 439 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 GIPP09681 153 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-214ENST00000560402 OR4E1P0C645 316 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 BCL3P20749 454 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 HTR1DP28221 377 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 RAB13P51153 203 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 P2RX3P56373 397 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 RAP2BP61225 183 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 LPCAT3Q6P1A2 487 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 RTN4RL2Q86UN3 420 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 FAM58AQ8N1B3 248 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 ZNF596Q8TC21 504 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 MRAPQ8TCY5 172 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 NEK7Q8TDX7 302 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 FYTTD1Q96QD9 318 aaKnown RBP10.88□□□□□ -0.67
SMAD3-214ENST00000560402 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
SMAD3-214ENST00000560402 AK3Q9UIJ7 227 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 C14orf166Q9Y224 244 aaKnown RBP10.88□□□□□ -0.67
SMAD3-214ENST00000560402 HILPDAQ9Y5L2 63 aa10.88□□□□□ -0.67
SMAD3-214ENST00000560402 TRGV10A0A0A0MS01 117 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 FCGR3AP08637 254 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 PRKACAP17612 351 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 SRSF7Q16629 238 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMAD3-214ENST00000560402 HIST2H2BDQ6DRA6 164 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 SLC25A42Q86VD7 318 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 LYG1Q8N1E2 194 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 C12orf45Q8N5I9 185 aaPredicted RBP10.87□□□□□ -0.67
SMAD3-214ENST00000560402 OR11H7Q8NGC8 314 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 OR4P4Q8NGL7 312 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 CAPSLQ8WWF8 208 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 PHB2Q99623 299 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 FAAP24Q9BTP7 215 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 DPM3Q9P2X0 92 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 ANXA10Q9UJ72 324 aa10.87□□□□□ -0.67
SMAD3-214ENST00000560402 MEX3AA1L020 520 aaKnown RBP10.86□□□□□ -0.67
SMAD3-214ENST00000560402 FAM172BPA6NC97 362 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 PSPNO60542 156 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 HLA-AP01891 365 aaKnown RBP10.86□□□□□ -0.67
SMAD3-214ENST00000560402 PGAM2P15259 253 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 CD34P28906 385 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 BRS3P32247 399 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 OR3A1P47881 315 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 KIR2DS1Q14954 304 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 OXLD1Q5BKU9 147 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 HEPN1Q6WQI6 88 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 LYG2Q86SG7 212 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 TPRX1Q8N7U7 411 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 OR2AK2Q8NG84 335 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 OR13C8Q8NGS7 320 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 ZFAND1Q8TCF1 268 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 SULT4A1Q9BR01 284 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 IL36RNQ9UBH0 155 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 MGAT4AQ9UM21 535 aa10.86□□□□□ -0.67
SMAD3-214ENST00000560402 SH2D1BO14796 132 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 RGS11O94810 467 aa10.85□□□□□ -0.67
SMAD3-214ENST00000560402 PRB2P02812 416 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms