RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PLA2G3Q9NZ20 509 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 MRPL27Q9P0M9 148 aaKnown RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 TAAR3PQ9P1P4 343 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 B3GAT1Q9P2W7 334 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 COPS7AQ9UBW8 275 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 HSPB7Q9UBY9 170 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 MRPS16Q9Y3D3 137 aaKnown RBP5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 RFNGQ9Y644 331 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 SPTBP11277 2137 aa5.05□□□□□ -1.6
SNRPA1-209ENST00000560307 PCNX3Q9H6A9 2034 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 TRBV6-6A0A0A6YYG2 114 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 A0A0U1RQK1 487 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 MDFIC2A0A1B0GVS7 189 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF320A2RRD8 509 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 RNF212BA8MTL3 300 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 TRIAP1O43715 76 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 SYNGR2O43760 224 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 IL11P20809 199 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 MSR1P21757 451 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 PPIFP30405 207 aaKnown RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 GNRHRP30968 328 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 COMPP49747 757 aaPredicted RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 ASCL1P50553 236 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 BLKP51451 505 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 CLDN15P56746 228 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 RBM11P57052 281 aaKnown RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 CCL7P80098 99 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 DEFB103AP81534 67 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 ARF1P84077 181 aaKnown RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 PLP2Q04941 152 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 RUNX3Q13761 415 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 SHBQ15464 509 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 NSDHLQ15738 373 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 OR10J3Q5JRS4 329 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 Q6ZWC4 215 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 SAXO1Q8IYX7 474 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 TCTEX1D1Q8N7M0 179 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 NECAP1Q8NC96 275 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 CPEB3Q8NE35 698 aaKnown RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF738Q8NE65 137 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 SLC37A2Q8TED4 501 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 RAB1CQ92928 201 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 RPUSD4Q96CM3 377 aaKnown RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 MMABQ96EY8 250 aaPredicted RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 SDSLQ96GA7 329 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 CIB3Q96Q77 187 aaPredicted RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 GAL3ST4Q96RP7 486 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 NUDT22Q9BRQ3 303 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF703Q9H7S9 590 aaPredicted RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 PNO1Q9NRX1 252 aaKnown RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 KCNIP2Q9NS61 270 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 MED29Q9NX70 200 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 RNF186Q9NXI6 227 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 PSENENQ9NZ42 101 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 PIGLQ9Y2B2 252 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 HS3ST3A1Q9Y663 406 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 COX11Q9Y6N1 276 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 LY96Q9Y6Y9 160 aa5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 TNRC6BQ9UPQ9 1833 aaKnown RBP5.04□□□□□ -1.6
SNRPA1-209ENST00000560307 ADAMTS20P59510 1910 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 IGHV2-70DA0A0C4DH43 119 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 LILRA5A6NI73 299 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF814B7Z6K7 855 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 NPIPB11E5RHQ5 1161 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 NDUFS8O00217 210 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 NDUFB8O95169 186 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 OR5G3P0C626 314 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 CRISP2P16562 243 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 COX5AP20674 150 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 HNF1AP20823 631 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 F2RP25116 425 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 CD1BP29016 333 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 GCH1P30793 250 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 OPRM1P35372 400 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 ARR3P36575 388 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 GUCA1AP43080 201 aaPredicted RBP5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 LHX2P50458 406 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 HNRNPA3P51991 378 aaKnown RBP5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 FUT6P51993 359 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 SLURP1P55000 103 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 HHEXQ03014 270 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 PMCHL1Q16048 86 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 DEFB110Q30KQ9 67 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 FAM78BQ5VT40 261 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM14EPQ6UXP3 125 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 C19orf35Q6ZS72 473 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 LINC00596Q86U02 117 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 WDFY1Q8IWB7 410 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 SFTPA1Q8IWL2 248 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 PRR22Q8IZ63 422 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM256Q8N2U0 113 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM217Q8N7C4 229 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF321PQ8N8H1 164 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 LINC01356Q8N9X3 169 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 SUMF1Q8NBK3 374 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 OR2M7Q8NG81 312 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 CCL4L1Q8NHW4 92 aa5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 RNASE8Q8TDE3 154 aaKnown RBP5.03□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM54Q969K7 222 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms