RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SLC35E4Q6ICL7 350 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 TMEM14EPQ6UXP3 125 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 ZNF610Q8N9Z0 462 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 PIGBOS1A0A0B4J2F0 54 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 LINC00473A8K010 186 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 C1QTNF9BB2RNN3 333 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 ZG16O60844 167 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 EGR1P18146 543 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 EDDM3AQ14507 147 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 ACSM6Q6P461 480 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 MBD3L1Q8WWY6 194 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 TAF15Q92804 592 aaKnown RBP eCLIP8.4□□□□□ -1.06
LRRC28-216ENST00000559819 PSMG3Q9BT73 122 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-216ENST00000559819 CISD1Q9NZ45 108 aaKnown RBP8.4□□□□□ -1.06
LRRC28-216ENST00000559819 HSPB7Q9UBY9 170 aa8.4□□□□□ -1.06
LRRC28-216ENST00000559819 IGHV1-18A0A0C4DH31 117 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 MAP1LC3B2A6NCE7 125 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 FTH1P19P0C7X4 201 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 P0C879 139 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 MAS1LP35410 378 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 MSMPQ1L6U9 139 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 ZNF674Q2M3X9 581 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 Q3ZCU0 254 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 TMEM41BQ5BJD5 291 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 CD177Q8N6Q3 437 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 CA5BP1Q8WTZ4 195 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 LRRC29Q8WV35 223 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 NINJ1Q92982 152 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 MAP1LC3BQ9GZQ8 125 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 TMPRSS5Q9H3S3 457 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 METTL1Q9UBP6 276 aaKnown RBP8.39□□□□□ -1.07
LRRC28-216ENST00000559819 PSG11Q9UQ72 335 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 IGHV2OR16-5A0A0B4J2B6 119 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 LRRC30A6NM36 301 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 CLN5O75503 358 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 IFNA17P01571 189 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 IGHV3-13P01766 116 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 IGHV3-7P01780 117 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 TFF3Q07654 80 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 DEFB109BQ30KR1 87 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 SPRNQ5BIV9 151 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 LRP11Q86VZ4 500 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 HIPK2Q9H2X6 1198 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 PARD6AQ9NPB6 346 aa8.39□□□□□ -1.07
LRRC28-216ENST00000559819 CHD3Q12873 2000 aaKnown RBP8.39□□□□□ -1.07
LRRC28-216ENST00000559819 IGHV3OR15-7A0A075B7D8 119 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 AP4M1O00189 453 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 AQP7O14520 342 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 KIAA0141Q14154 515 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-216ENST00000559819 ACSF3Q4G176 576 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-216ENST00000559819 RPP25LQ8N5L8 163 aaKnown RBP8.38□□□□□ -1.07
LRRC28-216ENST00000559819 GATAD1Q8WUU5 269 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 SLC25A22Q9H936 323 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 ASCL3Q9NQ33 180 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 A0A087WWC5 75 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 PRR33A8MZF0 331 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 FAM90A26D6RGX4 464 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 RBMXL2O75526 392 aaKnown RBP8.38□□□□□ -1.07
LRRC28-216ENST00000559819 YIF1AO95070 293 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 DEFA4P12838 97 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 KITLGP21583 273 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 GCH1P30793 250 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 CATR1Q13166 79 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 SLC35E3Q7Z769 313 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 ZBTB34Q8NCN2 500 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 OR2Z1Q8NG97 314 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 TAAR6Q96RI8 345 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 SSX3Q99909 188 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 FAM234AQ9H0X4 552 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 SEBOXQ9HB31 216 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-216ENST00000559819 PMS2P5A8MQ11 134 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 TNFSF13O75888 250 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 SERF2P84101 59 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 MSMO1Q15800 293 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 ZNF718Q3SXZ3 478 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 PIP4P1Q86T03 277 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 PRR7Q8TB68 274 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 DTD1Q8TEA8 209 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 LHX4Q969G2 390 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 STARD4Q96DR4 205 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-216ENST00000559819 DKK4Q9UBT3 224 aa8.38□□□□□ -1.07
LRRC28-216ENST00000559819 DSPP15924 2871 aaKnown RBP8.37□□□□□ -1.07
LRRC28-216ENST00000559819 TRAV17A0A0B4J275 112 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 CYB5BO43169 146 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 FGF7P21781 194 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 SMIM21Q3B7S5 101 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 SEM1Q6ZVN7 128 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 BHLHA15Q7RTS1 189 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-216ENST00000559819 H2BFWTQ7Z2G1 175 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 C1QL4Q86Z23 238 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 OR10G4Q8NGN3 311 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 SARAFQ96BY9 339 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 SLC39A9Q9NUM3 307 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 DUSP13Q9UII6 198 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 PROCRQ9UNN8 238 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 CACNA1DQ01668 2161 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 C15orf65H3BRN8 121 aa8.37□□□□□ -1.07
LRRC28-216ENST00000559819 ZNF737O75373 536 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms