RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 ITGB1BP1O14713 200 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 KRASP01116 189 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 HBE1P02100 147 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 TFF1P04155 84 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 ATF4P18848 351 aaPredicted RBP9.4□□□□□ -0.9
CLPX-204ENST00000559152 GPR12P47775 334 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 RPL30P62888 115 aaKnown RBP9.4□□□□□ -0.9
CLPX-204ENST00000559152 HOXA4Q00056 320 aaPredicted RBP9.4□□□□□ -0.9
CLPX-204ENST00000559152 IZUMO4Q1ZYL8 232 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 MORN2Q502X0 79 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 Q8NA96 180 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 KDF1Q8NAX2 398 aaPredicted RBP9.4□□□□□ -0.9
CLPX-204ENST00000559152 CLRN3Q8NCR9 226 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 RFESDQ8TAC1 157 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 SDSLQ96GA7 329 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 CIB3Q96Q77 187 aaPredicted RBP9.4□□□□□ -0.9
CLPX-204ENST00000559152 AGMATQ9BSE5 352 aa9.4□□□□□ -0.9
CLPX-204ENST00000559152 DSPP15924 2871 aaKnown RBP9.4□□□□□ -0.9
CLPX-204ENST00000559152 ANKRD11Q6UB99 2663 aaPredicted RBP9.4□□□□□ -0.9
CLPX-204ENST00000559152 FAM157AC9JC47 383 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 H3BP45 60 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 RAMP3O60896 148 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 C1QL1O75973 258 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 IGHV1-46P01743 117 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 P0C879 139 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 TNFRSF1AP19438 455 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 FHITP49789 147 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 RAB7AP51149 207 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 DHRS7BQ6IAN0 325 aaPredicted RBP9.4□□□□□ -0.91
CLPX-204ENST00000559152 H2BFWTQ7Z2G1 175 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 ZNF295-AS1Q8N0V1 137 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 PSMG3Q9BT73 122 aaPredicted RBP9.4□□□□□ -0.91
CLPX-204ENST00000559152 SCNM1Q9BWG6 230 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 GCM1Q9NP62 436 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 KCNJ16Q9NPI9 418 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 JKAMPQ9P055 326 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 GAB2Q9UQC2 676 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 GTF3C1Q12789 2109 aa9.4□□□□□ -0.91
CLPX-204ENST00000559152 IGHV3OR15-7A0A075B7D8 119 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 IGHV3-43A0A0B4J1X8 118 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 FAM90A9PA6NNJ1 464 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 ST8SIA5O15466 376 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 NUPL2O15504 423 aaKnown RBP9.39□□□□□ -0.91
CLPX-204ENST00000559152 IGHV3-43DP0DP04 118 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 IAPPP10997 89 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 G6PCP35575 357 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 EDDM3BP56851 147 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 TMEM267Q0VDI3 215 aaPredicted RBP9.39□□□□□ -0.91
CLPX-204ENST00000559152 ZNF816Q0VGE8 651 aaPredicted RBP9.39□□□□□ -0.91
CLPX-204ENST00000559152 ATP6V1FQ16864 119 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 LILRB2Q8N423 598 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 RBMXL1Q96E39 390 aaKnown RBP9.39□□□□□ -0.91
CLPX-204ENST00000559152 C5orf30Q96GV9 206 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 UNKLQ9H9P5 680 aaKnown RBP9.39□□□□□ -0.91
CLPX-204ENST00000559152 NGBQ9NPG2 151 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 ARID1AO14497 2285 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 FAM74A7A6NL05 159 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 C17orf98A8MV24 154 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 S1PR2O95136 353 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 HPRT1P00492 218 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 METTL15P1P0C7V9 234 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 CCKARP32238 428 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 KIR2DS2P43631 304 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 PPT1P50897 306 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 SERF2P84101 59 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 Q3ZCU0 254 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 FAM74A3Q4VXF1 159 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 SPANXN5Q5MJ07 72 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 BTNL3Q6UXE8 466 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 THNSL2Q86YJ6 484 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 ZNRF1Q8ND25 227 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 SLC35B3Q9H1N7 401 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 RBKSQ9H477 322 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 ZNF665Q9H7R5 613 aa9.39□□□□□ -0.91
CLPX-204ENST00000559152 TRGV10A0A0A0MS01 117 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 DEFB108AA8MXU0 73 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 RBFOX2O43251 390 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLPX-204ENST00000559152 CD55P08174 381 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 OR2B11Q5JQS5 317 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 STUMQ69YW2 141 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 TMEM14EPQ6UXP3 125 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 ZNF525Q8N782 197 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 DCTN5Q9BTE1 182 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 SCRT1Q9BWW7 348 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 CALYQ9NYX4 217 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 KIAA1456Q9P272 454 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 PRELID3BQ9Y3B1 194 aa9.38□□□□□ -0.91
CLPX-204ENST00000559152 DUTP33316 252 aaKnown RBP9.37□□□□□ -0.91
CLPX-204ENST00000559152 LOXL3P58215 753 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 LRRC75BQ2VPJ9 315 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 WFDC8Q8IUA0 241 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.37□□□□□ -0.91
CLPX-204ENST00000559152 PINX1Q96BK5 328 aaKnown RBP9.37□□□□□ -0.91
CLPX-204ENST00000559152 SNRNP40Q96DI7 357 aaKnown RBP9.37□□□□□ -0.91
CLPX-204ENST00000559152 ESRP2Q9H6T0 727 aaKnown RBP9.37□□□□□ -0.91
CLPX-204ENST00000559152 NDRG3Q9UGV2 375 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 MSRB2Q9Y3D2 182 aa9.37□□□□□ -0.91
CLPX-204ENST00000559152 TRAV1-1A0A0B4J248 108 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms