RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 DGCR2P98153 550 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 HNF4GQ14541 408 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 RNASE12Q5GAN4 147 aaKnown RBP9.09□□□□□ -0.95
SNX1-204ENST00000559061 HIST2H2BDQ6DRA6 164 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 C5orf56Q8N8D9 126 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 Q8N9W7 124 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 DRAXINQ8NBI3 349 aaPredicted RBP9.09□□□□□ -0.95
SNX1-204ENST00000559061 OR5AN1Q8NGI8 311 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 OR8U1Q8NH10 309 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 OR52I2Q8NH67 350 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 SPATA3Q8NHX4 192 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 WFDC12Q8WWY7 111 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 EDARADDQ8WWZ3 215 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 DDB2Q92466 427 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 OR2D2Q9H210 308 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 RANBP3Q9H6Z4 567 aaPredicted RBP9.09□□□□□ -0.95
SNX1-204ENST00000559061 PIPOXQ9P0Z9 390 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 GAB2Q9UQC2 676 aa9.09□□□□□ -0.95
SNX1-204ENST00000559061 CMYA5Q8N3K9 4069 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 CCDC160A6NGH7 325 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 A6NHS1 94 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 J3QRK9 145 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 TXNL1O43396 289 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 TMEM11P17152 192 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 TNFSF8P32971 234 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 CBX5P45973 191 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 BRWD1-AS2P59051 145 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 C11orf88Q6PI97 169 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 FAM131AQ6UXB0 335 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 OVCH2Q7RTZ1 564 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 OR5AP2Q8NGF4 316 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 MCFD2Q8NI22 146 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 GPHA2Q96T91 129 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 C6orf62Q9GZU0 229 aaPredicted RBP9.08□□□□□ -0.96
SNX1-204ENST00000559061 SCPEP1Q9HB40 452 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 KLK11Q9UBX7 282 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 OR2W1Q9Y3N9 320 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 V9GYH0 126 aa9.08□□□□□ -0.96
SNX1-204ENST00000559061 CLPSL1A2RUU4 121 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 LINC01548A6NM66 108 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 LINC00473A8K010 186 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 RGS5O15539 181 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 PMP2P02689 132 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 IGKV1-16P04430 117 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 FAM106CPP0CH98 169 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 OR5H8P0DN80 308 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 FCGR2CP31995 323 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 HRH1P35367 487 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 GPR12P47775 334 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 RFX2P48378 723 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 RPL30P62888 115 aaKnown RBP9.07□□□□□ -0.96
SNX1-204ENST00000559061 FOXL1Q12952 345 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 CDK10Q15131 360 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 ZNF79Q15937 498 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 C16orf82Q7Z2V1 217 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 FAM71E2Q8N5Q1 922 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.07□□□□□ -0.96
SNX1-204ENST00000559061 OR4F5Q8NH21 305 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 GINS4Q9BRT9 223 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 NPFFR1Q9GZQ6 430 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 WNT10AQ9GZT5 417 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 FXYD6Q9H0Q3 95 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 MTFP1Q9UDX5 166 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 PITPNC1Q9UKF7 332 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 RBMX2Q9Y388 322 aaKnown RBP9.07□□□□□ -0.96
SNX1-204ENST00000559061 MOB4Q9Y3A3 225 aa9.07□□□□□ -0.96
SNX1-204ENST00000559061 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 M0R1X1 148 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 SULT1C2O00338 296 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 PLXNB1O43157 2135 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 TPPPO94811 219 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 MOSP00540 346 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 PPYP01298 95 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 CRYBA1P05813 215 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 CTXN2P0C2S0 81 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 HLA-DMAP28067 261 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 DUTP33316 252 aaKnown RBP9.06□□□□□ -0.96
SNX1-204ENST00000559061 ARPC4P59998 168 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 DYRK1AQ13627 763 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 HES1Q14469 280 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 MRGPRG-AS1Q2M3A8 158 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 ABCA11PQ4W5N1 156 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 DHRS11Q6UWP2 260 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 CCDC190Q86UF4 302 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 OR4D10Q8NGI6 311 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 OR4C13Q8NGP0 309 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 OR2T10Q8NGZ9 312 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 SMIM4Q8WVI0 70 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 MRGPRFQ96AM1 343 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 DGCR14Q96DF8 476 aaKnown RBP9.06□□□□□ -0.96
SNX1-204ENST00000559061 DIRAS2Q96HU8 199 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 HSPB9Q9BQS6 159 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 RAB18Q9NP72 206 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 IFT46Q9NQC8 304 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 NECAP2Q9NVZ3 263 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 ZNF107Q9UII5 783 aaPredicted RBP9.06□□□□□ -0.96
SNX1-204ENST00000559061 RNF114Q9Y508 228 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 A3GALT2U3KPV4 340 aa9.06□□□□□ -0.96
SNX1-204ENST00000559061 OR5H14A6NHG9 310 aa9.05□□□□□ -0.96
SNX1-204ENST00000559061 M0QYG6 137 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms