RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 AGMATQ9BSE5 352 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 CCDC90BQ9GZT6 254 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 C11orf54Q9H0W9 315 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-235ENST00000557740 NKX1-2Q9UD57 310 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-235ENST00000557740 ZNF221Q9UK13 617 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 HSF4Q9ULV5 492 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 AK6Q9Y3D8 172 aaKnown RBP11.36□□□□□ -0.59
SHMT2-235ENST00000557740 FBXO7Q9Y3I1 522 aa11.36□□□□□ -0.59
SHMT2-235ENST00000557740 LINC01619G3V211 115 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 SAP30O75446 220 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 LGALS1P09382 135 aaKnown RBP11.35□□□□□ -0.59
SHMT2-235ENST00000557740 CPEP16870 476 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 CALRP27797 417 aaKnown RBP11.35□□□□□ -0.59
SHMT2-235ENST00000557740 VEGFCP49767 419 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 MRPS15P82914 257 aaKnown RBP11.35□□□□□ -0.59
SHMT2-235ENST00000557740 MLLT11Q13015 90 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-235ENST00000557740 C19orf54Q5BKX5 351 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 PYHIN1Q6K0P9 492 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 TMEM91Q6ZNR0 172 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 ZNF429Q86V71 674 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 PPP1R27Q86WC6 154 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 FAM89BQ8N5H3 189 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 OR56B1Q8NGI3 324 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 OR5AN1Q8NGI8 311 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 FAM3DQ96BQ1 224 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 ARHGAP5-AS1Q96IT6 56 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 CLCC1Q96S66 551 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 RNF5Q99942 180 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 CMSS1Q9BQ75 279 aaKnown RBP11.35□□□□□ -0.59
SHMT2-235ENST00000557740 PECRQ9BY49 303 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 ALX4Q9H161 411 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-235ENST00000557740 Q9N2K0 584 aa11.35□□□□□ -0.59
SHMT2-235ENST00000557740 METTL1Q9UBP6 276 aaKnown RBP11.35□□□□□ -0.59
SHMT2-235ENST00000557740 SOX15O60248 233 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 APOA2P02652 100 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 SCTP09683 121 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 CD40LGP29965 261 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 CLDN12P56749 244 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
SHMT2-235ENST00000557740 ACTBL2Q562R1 376 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 DRAXINQ8NBI3 349 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-235ENST00000557740 CASTOR1Q8WTX7 329 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 TSNAXQ99598 290 aaKnown RBP11.34□□□□□ -0.59
SHMT2-235ENST00000557740 FAM103A1Q9BTL3 118 aaKnown RBP11.34□□□□□ -0.59
SHMT2-235ENST00000557740 TOLLIPQ9H0E2 274 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 DUSP21Q9H596 190 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 GAB2Q9UQC2 676 aa11.34□□□□□ -0.59
SHMT2-235ENST00000557740 FOXI3A8MTJ6 420 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-235ENST00000557740 TRDCB7Z8K6 153 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 FCN1O00602 326 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 DENRO43583 198 aaKnown RBP11.33□□□□□ -0.6
SHMT2-235ENST00000557740 SPDEFO95238 335 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 CA2P00918 260 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 SLURP1P55000 103 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 PSG5Q15238 335 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 CD200R1LQ6Q8B3 271 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 PDPNQ86YL7 162 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 NRG4Q8WWG1 115 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 DLX4Q92988 240 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-235ENST00000557740 PTX4Q96A99 478 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 ASCL2Q99929 193 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 ACOT13Q9NPJ3 140 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 RDH8Q9NYR8 311 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 NUBP2Q9Y5Y2 271 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 SMAD5-AS1Q9Y6J3 95 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 V9GY05 133 aa11.33□□□□□ -0.6
SHMT2-235ENST00000557740 M0R1X1 148 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 IGHV3-11P01762 117 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 TFAP2AP05549 437 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 CD3GP09693 182 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 EGR2P11161 476 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-235ENST00000557740 MAP2K4P45985 399 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 SERPINB10P48595 397 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 PSMD7P51665 324 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 TMEM50BP56557 158 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 TPPP2P59282 170 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 FABP5Q01469 135 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 ZNF562Q6V9R5 426 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 PRSS48Q7RTY5 328 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 ZNF383Q8NA42 475 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-235ENST00000557740 LFNGQ8NES3 379 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 OR4A4PQ8NGN8 299 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 GRPEL2Q8TAA5 225 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 MS4A10Q96PG2 267 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 MGLLQ99685 303 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 STAB2Q8WWQ8 2551 aa11.32□□□□□ -0.6
SHMT2-235ENST00000557740 IGHV4OR15-8A0A075B7B6 117 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 A0A087WW49 117 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 IGKV1-6A0A0C4DH72 117 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 TMEM272A0A1B0GTI8 110 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 BET1O15155 118 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 FABP7O15540 132 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 SLC25A17O43808 307 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 OR8U9P0C7N5 309 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 CRHBPP24387 322 aa11.31□□□□□ -0.6
SHMT2-235ENST00000557740 PITPNAQ00169 270 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms