RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 H7C2Y5 167 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 MYL12BO14950 172 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 GLT8D1Q68CQ7 371 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 MS4A15Q8N5U1 240 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 PACRGLQ8N7B6 248 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 PHYHIPQ92561 330 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 KCNK15Q9H427 330 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 SLA2Q9H6Q3 261 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 CHMP1AQ9HD42 196 aaPredicted RBP12.24□□□□□ -0.45
SCFD1-224ENST00000557713 C19orf73Q9NVV2 129 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 METTL1Q9UBP6 276 aaKnown RBP12.24□□□□□ -0.45
SCFD1-224ENST00000557713 LYSTQ99698 3801 aa12.24□□□□□ -0.45
SCFD1-224ENST00000557713 A0A0A6YYD4 124 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 TMEM14DPA8MWL7 114 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 A8MZ25 164 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 LDLRAD4O15165 306 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 SLC22A1O15245 554 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 IGLV1-51P01701 117 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 GNAO1P09471 354 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 CEACAM6P40199 344 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 TPPP2P59282 170 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 SRSF7Q16629 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
SCFD1-224ENST00000557713 AHSA2Q719I0 299 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 MOB1BQ7L9L4 216 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 HAPLN4Q86UW8 402 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 SETD6Q8TBK2 473 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 FBLIM1Q8WUP2 373 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 PTX4Q96A99 478 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 ELOVL1Q9BW60 279 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-224ENST00000557713 C8orf4Q9NR00 106 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 PLEKHJ1Q9NW61 149 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 FKBP14Q9NWM8 211 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 GAR1Q9NY12 217 aaKnown RBP12.23□□□□□ -0.45
SCFD1-224ENST00000557713 OR1A1Q9P1Q5 309 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 CSMD3Q7Z407 3707 aa12.23□□□□□ -0.45
SCFD1-224ENST00000557713 LCE6AA0A183 80 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 CA2P00918 260 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 TRGV3P03979 118 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 IGKV1-16P04430 117 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 TFAP2AP05549 437 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 IGHV4-30-4P0DP06 118 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 SRMP19623 302 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 ZBTB25P24278 435 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 CD40LGP29965 261 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 LINC00205P59089 165 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 C8orf59Q8N0T1 100 aaPredicted RBP12.22□□□□□ -0.45
SCFD1-224ENST00000557713 DRAXINQ8NBI3 349 aaPredicted RBP12.22□□□□□ -0.45
SCFD1-224ENST00000557713 EDARADDQ8WWZ3 215 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 HDHD3Q9BSH5 251 aaPredicted RBP12.22□□□□□ -0.45
SCFD1-224ENST00000557713 LPAR5Q9H1C0 372 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 EDA2RQ9HAV5 297 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 PALMDQ9NP74 551 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 AK3Q9UIJ7 227 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 STUB1Q9UNE7 303 aa12.22□□□□□ -0.45
SCFD1-224ENST00000557713 EPPK1P58107 5090 aaKnown RBP12.22□□□□□ -0.45
SCFD1-224ENST00000557713 STARD9Q9P2P6 4700 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 SOCS1O15524 211 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 HSPA12AO43301 675 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 SPDEFO95238 335 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 CPEP16870 476 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 RBM48Q5RL73 367 aaKnown RBP12.21□□□□□ -0.45
SCFD1-224ENST00000557713 RNLSQ5VYX0 342 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 FAM89BQ8N5H3 189 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 ZNF383Q8NA42 475 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 BPIFB6Q8NFQ5 453 aa12.21□□□□□ -0.45
SCFD1-224ENST00000557713 TSNAXQ99598 290 aaKnown RBP12.21□□□□□ -0.45
SCFD1-224ENST00000557713 RANGRFQ9HD47 186 aaPredicted RBP12.21□□□□□ -0.45
SCFD1-224ENST00000557713 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-224ENST00000557713 BPNT1O95861 308 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 SCTP09683 121 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 TMEM50BP56557 158 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 RPS16P62249 146 aaKnown RBP12.2□□□□□ -0.46
SCFD1-224ENST00000557713 HLA-DRB3P79483 266 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 SSBP2P81877 361 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-224ENST00000557713 KLF5Q13887 457 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-224ENST00000557713 FXYD3Q14802 87 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 CEACAM19Q7Z692 300 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 ANKRD13BQ86YJ7 626 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 POC5Q8NA72 575 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 OR6M1Q8NGM8 313 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 TMED9Q9BVK6 235 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 Q9N2K0 584 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 HSF4Q9ULV5 492 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 MGAT4AQ9UM21 535 aa12.2□□□□□ -0.46
SCFD1-224ENST00000557713 IGKV1-6A0A0C4DH72 117 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 H3BUA1 57 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 UCHL1P09936 223 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 HSD17B12Q53GQ0 312 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 ZFAND6Q6FIF0 208 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 PDPNQ86YL7 162 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 SGPP2Q8IWX5 399 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 OR5T1Q8NG75 326 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 RSRP1Q9BUV0 290 aa12.19□□□□□ -0.46
SCFD1-224ENST00000557713 LSM2Q9Y333 95 aaKnown RBP12.19□□□□□ -0.46
SCFD1-224ENST00000557713 C13orf42A0A1B0GVH6 325 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 SLC25A17O43808 307 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 BRI3O95415 125 aa12.18□□□□□ -0.46
SCFD1-224ENST00000557713 IGLV2-23P01705 113 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms